| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4225 |
|---|
| Symbol | |
|---|
| ID | 5319299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 708000 |
|---|
| End bp | 708500 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640776030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001312963 |
|---|
| Protein GI | 150376367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.360299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA ACAGTGCGAA TGGGATCAGC CGCTTTGCTG TGGAACTTGG CGTCGCCGCG
CTGACAGGTG TCTTTGGGAT CGCTGTCTGC TACGGCTCAC TCGATATCGG CGCGGGCTGG
ACCGATATGG GTCCGGATGC GGGCTATTTC CCTTTCTATA TCGGCCTGCT CATCGTTCTC
GGCAGCCTCG CCAATATCGC GCACGCATTC TTCAAGCATC GCGGTACGGG CGAGGTCTTC
CTCGACGGCG CCCGTACCAG GGTGGTCGCC TCCTTCCTGC TGCCGATCGC CGCCTTCGCG
GGCGTTTCCG CGTGGCTGGG GCTTTATGTC GGAACGGCGC TCTACATTGC CGCGACCATG
CTCTTCCAGG GGCGCTACAA ATGGTGGATC TCGTTGCCGG CGGGACTCGG CGTCTCGATC
TTCTTTTTCA TCGTTTTCGA GATCGGCTTC CAGGTTCCGC TATTGAAGGG ACCGGTCGAG
GCTTGGTTCG GAATTTACTG A
|
|---|
| Protein sequence | MSENSANGIS RFAVELGVAA LTGVFGIAVC YGSLDIGAGW TDMGPDAGYF PFYIGLLIVL
GSLANIAHAF FKHRGTGEVF LDGARTRVVA SFLLPIAAFA GVSAWLGLYV GTALYIAATM
LFQGRYKWWI SLPAGLGVSI FFFIVFEIGF QVPLLKGPVE AWFGIY
|
|---|
| |