Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4221 |
Symbol | |
ID | 5319295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 704147 |
End bp | 704872 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776026 |
Product | ABC transporter related |
Protein accession | YP_001312959 |
Protein GI | 150376363 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAG CGCCGCTTGA GGTCGACAAT CTCTCCGCCG GTTATGGGCC GACGCGGGTG CTGGAAGGAA TTTCCTTTTC CGTGTCTGCC GGCGCGAAGC TTGCGGTTCT CGGGCGTAAT GGCATGGGCA AGACGACGCT GCTCGCTACG CTCGCCGGCC AGACGCGCCG TTATGACGGG CGCATCCGTA TCGGCGAGGC CGATGTCACC GCGCTGTCGA GCGCATCACG CGCGCTGAAA GGCCTCGGCT TCGTGCCGCA GGCGCGCTGC GTTTTCCCGT CGCTGACGGT CGAGGAAAAT CTCTTCGTCG GCCTCAAGGG CCGTGCGAAG ACGGCGCTGA ACGAAGCTTA CGAGATGTTT CCGCGCCTCT ATGAGAGGCG CAGGAACTTG GGCTCGCAGC TTTCGGGCGG CGAGCAGCAG ATGCTGTCGA CAGCCCGCTC GATCCTCGGC CGGCCATCCA TTCTGCTTCT CGACGAGCCG CTCGAAGGAC TGGCCCCGGT CATCTGCGAG GAACTGATGA AAGCCTTCGC CCAGCTTGCA AGGACCGGCG ATATGACGAT CCTGCTCGTC GAGCAGCGCA TTCGGAGCGC GCTCGATTTC GCCGACCGGG TGATCATCCT GGAGCGCGGG CGGCTCGCAT GGAGCGGAAC GCCGAAGGCG CTTGTGAAGG AGCCCGCCAC GGTCGAGCAG CTGCTGGGGA TTGGCGGGTT GGCGCCGAGC CCTTGA
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Protein sequence | MPAAPLEVDN LSAGYGPTRV LEGISFSVSA GAKLAVLGRN GMGKTTLLAT LAGQTRRYDG RIRIGEADVT ALSSASRALK GLGFVPQARC VFPSLTVEEN LFVGLKGRAK TALNEAYEMF PRLYERRRNL GSQLSGGEQQ MLSTARSILG RPSILLLDEP LEGLAPVICE ELMKAFAQLA RTGDMTILLV EQRIRSALDF ADRVIILERG RLAWSGTPKA LVKEPATVEQ LLGIGGLAPS P
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