| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4219 |
|---|
| Symbol | |
|---|
| ID | 5319293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 702398 |
|---|
| End bp | 703405 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776024 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001312957 |
|---|
| Protein GI | 150376361 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGG CTACGACGAA CCAGGCAGAG GCGCCCCTTC TTTCGGGCAG GCACGGGCTC
GGCCGTGATC TTGCCGCTCT CGCCGTGATA CTTGTCCTGG CCGTCATCGG TTATCTTCTG
TTCCCGAACA ATCTGGCGCT GCTCACGCGC ATCATGGCGA TCGCCCTCCT GGTTCTCTCA
CTCGACCTGG TGACGGGCTA TTGCGGCGTC GCGACCCTCG GCCATGCGGC GCTGTTCGGC
AGCGGCGCTT ATGCCGCCGG GATCGCGGCC GTTCATTTCG GCATCACCGA TCCGCTCCTT
ATGGTCGCCG CCGGCATCAT CGGCGGTGCG CTTGCCGGGC TCGTCTGCGG CGTCGTAATT
TTGAGGGCCC ACGGCCTCCC GCAGCTCGTG CTCTCGATCG CCCTCATCCA TCTGTTCCAT
GAATTCGCCA ACAAGGCGTC GTCCTGGACG GGCGGCAGCG ATGGATTGGC GGGCATCGCG
CCCGATCCTC TTTTTGGAAT TTTCGCTTAC GACCTGTGGG GCCGCACGGC CTATGTCTTC
GCAGTCGTGC TGCTCGCAAT CGTCTTCATG TTCCTTCGTC TCGTCGTGCG CTCACCCTTT
GGCATGCTCT GCCGCGGCAT CAAGGAGGAC CCGATCCGCA TTCAGGCAAT GGGCGGGTCG
CCGACGATCG CCCTCCTCAA GATGTATGTA ATTTCCGGTG CGGTCGCTGG CGTCGGCGGG
GCACTCAACG CCGTCTCGAC GCAGGTCGTC GGTCTCGACA GCCTCTCCTT CACGCTCTCG
GCCGAAAGCC TGGTCATGCT CGTGCTCGGC GGCACCGGCT CGCTCTTCGG GGCCGTCACC
GGTACGATCG TTTTCATGCT CTTCGAAGAT CTCGTCTCGG CGGCCAACCC GTTTCATTGG
CTCACCATGG TCGGAGCCCT GTTGATTGCG GTTGTGCTCT TTGCGCCGAA AGGGCTTTAC
GGCACGGTCG CAGAAGTCCT CGCGCGGCGA CGGGGGGCGG GCCGATGA
|
|---|
| Protein sequence | MTTATTNQAE APLLSGRHGL GRDLAALAVI LVLAVIGYLL FPNNLALLTR IMAIALLVLS
LDLVTGYCGV ATLGHAALFG SGAYAAGIAA VHFGITDPLL MVAAGIIGGA LAGLVCGVVI
LRAHGLPQLV LSIALIHLFH EFANKASSWT GGSDGLAGIA PDPLFGIFAY DLWGRTAYVF
AVVLLAIVFM FLRLVVRSPF GMLCRGIKED PIRIQAMGGS PTIALLKMYV ISGAVAGVGG
ALNAVSTQVV GLDSLSFTLS AESLVMLVLG GTGSLFGAVT GTIVFMLFED LVSAANPFHW
LTMVGALLIA VVLFAPKGLY GTVAEVLARR RGAGR
|
|---|
| |