| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4201 |
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| Symbol | |
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| ID | 5319096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 682428 |
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| End bp | 683309 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776006 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001312939 |
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| Protein GI | 150376343 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAC CCGTTCCTAA TTATGAACTC TATGGCGAGA AATCCCGCGA GCGTCCGGAT
TTCTGGCTGC ATTGCGAGAC CATTCACGCC CGCAGCAGCC TCTACCGCTG GGAGATCGGT
CTTCACCGGC ACGAGCGCTT CTTTCAAATA TTGTACATTG CCGGCGGCTC CGGCGATGCC
CTTTTCGAGA AGACGGTCGA GCAGATCTCG TCGCCGGCTG TCATCACCGT CCCGCCCGGC
ATTGGCCATG GCTTCCGGTT TTCGCCTGAT GTCGACGGCT TCGTCTTCAC TGTGCTCGCA
TCGCATCTGC CGATTTCGCC GGGCCGAAGC AGCCGGCCGG GCGCCTGGAT GGCAGCGCCG
CGCTTGACGC CGCTCGGCGG CAGCGAAGAC GGCCGCTATA TCGGCGAGAC GCTGCGCCGC
CTCGCAACCG AGTGTGAGGC GGGGCTCAGC CACCGCACCG TCCTGCTCGA CGCCTACCTG
ACGACCGCCC TTGTCCTTAC GGGGCGGTTG GCCGAAGGCG GCGATGACGA AGGCGCGGAA
AGCGAGAATG AACGCCGGAT GGAGCGTTTC GACGCGCTCC TGCGCCAACA CTATCTCACG
CACCGTCCGG CTGCTTTCTA TGCGCGCGCA CTCGGGCTCT CCCCGACCCA TTTCAGCCGC
ATCGTCCGCG CAGCCACCGG CCGGAGCCTG CACGAGGTGA TTGCCGGCAA ACTCGTCGAA
GAAGCAAAGC GCCAGCTCCT GTTCACCCGG GGCAGCGTGC AGCAGATCGG ATTTCGCCTC
GGCTTTGGCG ACCCGGCTTA TTTCTCACGC TTCTTCCTGC GCCGCACTGG TATGACGCCG
CGCGCCTGGC GGACAGCCGA ACGGGAAAGA CTTGGTGCCT GA
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| Protein sequence | MKAPVPNYEL YGEKSRERPD FWLHCETIHA RSSLYRWEIG LHRHERFFQI LYIAGGSGDA
LFEKTVEQIS SPAVITVPPG IGHGFRFSPD VDGFVFTVLA SHLPISPGRS SRPGAWMAAP
RLTPLGGSED GRYIGETLRR LATECEAGLS HRTVLLDAYL TTALVLTGRL AEGGDDEGAE
SENERRMERF DALLRQHYLT HRPAAFYARA LGLSPTHFSR IVRAATGRSL HEVIAGKLVE
EAKRQLLFTR GSVQQIGFRL GFGDPAYFSR FFLRRTGMTP RAWRTAERER LGA
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