Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4196 |
Symbol | |
ID | 5318954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 677611 |
End bp | 678135 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776001 |
Product | hypothetical protein |
Protein accession | YP_001312934 |
Protein GI | 150376338 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00164803 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCC GACTGACGAC CGCAGCGACC GCAATCGCCC TGCTTATCGG CGCCAGCGGT GCGCTCGGCA ACGATAAGCC GACGGATCCG CAAATTGCCC ATATCGCCTA CACCGCAGGC CTCCTCGACA TCGAAGCGGC AAAACAGGCG ATCGCAACAT CTAAGAACAA GACCGTCGTC GAATTCGCCG AGAGCATGCT GCGCGACCAC GAAACGGTGA ACACGCAAGC CCTCGACCTC GTCAAGAAAC TCAACGTCAC GCCGGAAGAC AACGACACCA GCAAGTCGCT CTCGCAGGCG GCCGAGTCGA AGCGTCAGGA ACTGGCAAAG CTGGAGGGTG CGGCGTTTGA CAAGGCCTAT ATCGAGCAAG AGGTCGCTTA TCACAAGCAG GTCAACGGCG CGCTGGAAAC GCTGCTGATT CCGTCAGCTC AGAACGCCGA ACTCAAATCG CTGCTCGAGA CCGGCCTTAA GCTGTTTCGG GGGCATCAGC AGCATGCCGA ACATGTCGCG GCCGAATTGA AGTGA
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Protein sequence | MTIRLTTAAT AIALLIGASG ALGNDKPTDP QIAHIAYTAG LLDIEAAKQA IATSKNKTVV EFAESMLRDH ETVNTQALDL VKKLNVTPED NDTSKSLSQA AESKRQELAK LEGAAFDKAY IEQEVAYHKQ VNGALETLLI PSAQNAELKS LLETGLKLFR GHQQHAEHVA AELK
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