Gene Smed_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4181 
Symbol 
ID5319347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp661427 
End bp661765 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content60% 
IMG OID640775986 
Productregulatory protein ArsR 
Protein accessionYP_001312919 
Protein GI150376323 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.903708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.092541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGC TCAGCAGCAC CTTGTCGGCA TTGGCCGATC CGACCCGTCG TGCCATCATT 
GCTCGTCTTG CCGCCGGCGA GGCGACGGTG AACGAACTTG CAGCGCCTTT CGACATGAGC
CTGCCGGCGG TTTCCAAGCA TCTGAAGGTA TTGGAACGCG CGGGACTGAT TTCGCGCGGG
CGCAACGCCC AGTGGCGGCC CTGCCGGCTA GAGGCAGCGC CGTTGAAGGG AATTGCCGAT
TGGATCGAAC GATACCGTGA TTTCTGGACG CATGGCTTCG ATCGACTGGA CAGCTATCTT
GATGAACTGC AGCGCAACGA GAAGTCGGAT CACGAGTGA
 
Protein sequence
MDPLSSTLSA LADPTRRAII ARLAAGEATV NELAAPFDMS LPAVSKHLKV LERAGLISRG 
RNAQWRPCRL EAAPLKGIAD WIERYRDFWT HGFDRLDSYL DELQRNEKSD HE