| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4168 |
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| Symbol | |
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| ID | 5319197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 642350 |
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| End bp | 643339 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640775973 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001312906 |
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| Protein GI | 150376310 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.28666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC ATTCGTCCAA AACCTCCTCT TCCGCTTCTG AGGATTTTCT GACCGAGCTG
TTGCGCGGGC TCCGTCTCGA CGGGGTGGAT TACGTCCGCT GCGAATTGAC GGCACCCTGG
GGGATCTCAT TTCCGGCGCA GGAGACGGCG CGCTTCCATT TCATCTGCGG GGATTGCTGG
CTGCGCGTCG CCGACGGGGA CTGGATCGAG TTGAAGCGCG GCGATGCCGT GCTCCTGCCG
CGCGGCGGCG AGCACGCGCT GGCAAGCATG CCAGGCGAGA AACTCGCTCC GCTCGACGCC
TATTCGGTCC AGGAAGTATG CCATTGCGTC TACAATGTCT GCGGCGGCGG GCGCGGCGAG
ACCACCATTC TTTTCTGCGG CAGCCTCAGG TTCAACATGG ATTCCATGCA TCCGCTGCTG
CGCATGATGC CGGACGTGAT GCGAATCAAC GCACTGACCG CCAGCGAGCC GGCTATCCCG
CACATGCTCG ACGCCATGGC GCGGGAAGTC GGCGCCAGCC GCGTCGGTTC CGGCGGTGTC
CTGGCGCGGC TCGCCGACGT GCTCGCGGCC CTCATCATCC GTTCCTGGGT TGAACACGGA
TGCGGCAATA CCAGCGGCTG GGTGGCGGCG GTCCGCCACC CCGGCCTCGG CCGGGTCATC
GCGGCCATGC ACCTCGACCC GGAAAAGGCC TGGACCGTCG ACTCCCTCGC CAGGCTGATG
GGCGCCTCGC GTTCCGGCTT CGCTCAGCAA TTCGCCAGCG TGGTCGGCGA GACGCCGGCC
CGCTACCTTG CGCAAGTGCG TATGCACCAG GCACGTCAGT GGCTGACCCG CGACCGCATG
CGTATCTCGG TCGTGGCACG TCGCCTCGGC TATGATTCGG AAGCCTCCTT CAGCCGCGCC
TTCAAGCGCG TGATCGGCCA GCCGCCGAGT CATTATCGTG GCGCCGACCC GGCCGAGGTC
TCCACATTCG CTGGCGAGAG CAGACCCTGA
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| Protein sequence | MLDHSSKTSS SASEDFLTEL LRGLRLDGVD YVRCELTAPW GISFPAQETA RFHFICGDCW
LRVADGDWIE LKRGDAVLLP RGGEHALASM PGEKLAPLDA YSVQEVCHCV YNVCGGGRGE
TTILFCGSLR FNMDSMHPLL RMMPDVMRIN ALTASEPAIP HMLDAMAREV GASRVGSGGV
LARLADVLAA LIIRSWVEHG CGNTSGWVAA VRHPGLGRVI AAMHLDPEKA WTVDSLARLM
GASRSGFAQQ FASVVGETPA RYLAQVRMHQ ARQWLTRDRM RISVVARRLG YDSEASFSRA
FKRVIGQPPS HYRGADPAEV STFAGESRP
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