| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4146 |
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| Symbol | |
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| ID | 5319142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 619137 |
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| End bp | 620054 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775951 |
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| Product | PaaX family transcriptional regulator |
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| Protein accession | YP_001312884 |
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| Protein GI | 150376288 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.85173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGGC AGGGCGACAA CTCGGCAAAG GCGGGCTCAA AGGCCATCCG GGAAATTCTG
GATGAAGTGC CCCTCCGAGC CGCGAGCTTC ATCGTCACGA TCTATGGGGA CGTGGTCGAG
CCACGCGGCG GCGCGATTTG GATCGGCAAC CTGATCGAGA TCTGCGCCGG TGTCGGAATC
AGCGAAACGC TTGTGAGAAC CGCCGTATCC CGCCTCGTTG CAGCCGGGCG GCTTGCCGGA
GAGCGGGAGG GACGGCGCAG CTTTTACCGC CTCACCGATG CCGCGCGTAC GGAGTTCGCC
GGCGCCGCGC GGGTTATTTT CGGGCCTCCG GAGGAGGCGA GCTGGCACTT CGTGCAGCTG
ATGGGTTCAT CGGCCGAGGA CCGGATGCTG ATGCTCGAAC GATCCGGTTA TGCGCGCCTG
AGCCCTCGGC TTGCAATCGG CGTGCGGCCT TTCCCGACCG CGATCATGCC CGCGCTGGTC
TTCAGAGCGG AGATTGCCGA AGGTGCGGAA GAGTTGAAGG CGTTCGCCTC GGCCTCGTGG
GATCTCGCAC CCCATGCAGA GGCGTACCGG CGATTTCTCG GCTCCTTTCA ATCGCTTGCA
GCACCTGCGG ATGCTGGGTC GATGACACCT GCGGATTGTC TTACCGCGCG CCTCCTGCTG
GTGCATCAGT TCCGCTTTGT GGCGCTGCGC GATCCGCGCC TGCCTGCCGA AACCCTCCCG
GAAGGCTGGC CGGGTGACGA GGCCCGCCGG CTGTTCGCCA GGCTCTACCT CAATCTTTCT
CATCCGGCTG ACCTGCATGC GGCGCAGCAC TTCGTTGCGG CTTCGGGGCC GCTGGCAGCC
TCCACGGGAG CGACCGAGGA ACGGTTTCGG ATGCTGCGGA GGGAAGGTGT TCCCGCGAGC
GGCTGTAAAT CCGTTTGA
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| Protein sequence | MQGQGDNSAK AGSKAIREIL DEVPLRAASF IVTIYGDVVE PRGGAIWIGN LIEICAGVGI
SETLVRTAVS RLVAAGRLAG EREGRRSFYR LTDAARTEFA GAARVIFGPP EEASWHFVQL
MGSSAEDRML MLERSGYARL SPRLAIGVRP FPTAIMPALV FRAEIAEGAE ELKAFASASW
DLAPHAEAYR RFLGSFQSLA APADAGSMTP ADCLTARLLL VHQFRFVALR DPRLPAETLP
EGWPGDEARR LFARLYLNLS HPADLHAAQH FVAASGPLAA STGATEERFR MLRREGVPAS
GCKSV
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