| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4133 |
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| Symbol | |
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| ID | 5319275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 601177 |
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| End bp | 603441 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775938 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001312871 |
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| Protein GI | 150376275 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.894535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTG TTACTTCCTT CAACGATTCG TGGGTCTTCT CCGCGGGCTT CACTGCGGCG
GACGCCGGTA CGCTCCAGGC GGGGCAGCCG ATCAGACTTC CGCACAACGC CATCGAACTG
CCGTTCAACT ATTTTGACGA GACATGCTAC CAGCGCGCCT TCACCTATCA AAAGGTCCTC
GCCTGGCGGC CCGACTTCTC CGGCCGCGAA GTCTCGCTCG TCTTCGACGC GGCGATGGCC
GATGCGGTCG TGTATCTTAA CGGCGAAGAG ATCGTCGCGC ACAAGGACGG CTATACGCCG
ATCGAGGCGC GCCTGACCGG CAGGCTTCGG GAGGGCGACA ATCTCATCAC CGTAAAGATC
GACGGTAGTG AGAACCCGGA GATACCGCCG TTCGGCGGCC GGATCGATTA TCTCACCTTT
GCAGGTATCT ATCGCGACGT CTGGCTCAAG ATCACGGATC CCGTTTCGAT CGCCAATATC
AAGATCGAGA CCCGCGACGT GCTCTCCGAT GCCAGGACCG TCTCCGTCCG TTGCGACCTA
GCCAATCCGC AAGGCCTTTC CTTCACCGGG GCCGTATCGG CACTCCTCAA GGATGCCGCC
GGCGATGTGC TGGCAGAGGT GGCTGGCGAG ACGGCTGGTG GTGGCGTCAC CGTCCAGATG
GACGGCCTCA AAGGCCTCTC CCTCTGGGAC ATCGACGATC CGGTGCTCTA TGAGGTCGAA
GTCGAACTCA GGACCGGCCG AGGGTCCGAC CGCGTCGCCG CGCATTTCGG TTTCCGCACC
GCGGAGTTCA CGAACGAAGG CTTTCGGCTC AACGGCCGTC TGCTGAAGAT CCGCGGCCTC
AACCGTCATC AGTCCTTCCC CTATGTCGGC TACGCAATGG GGCGCACCGC CCAGGAGCGC
GACGCGGAAA TCATGAAGCA CACCCTTCAT TGCAACCTCG TCCGCACGTC GCACTACCCG
CAGTCGAAGT GGTTCCTCGA CCATTGCGAC CGAATTGGCC TGCTCGTCTT CGAGGAAATT
CCAGGCTGGC AGCATATAGG CGGCGAGGCC TGGAAAGAGG AGGCGATCCT GAACGTGGCC
CGCATGATCG AGCGTGACTG GAACCATCCC TCGATCGTCA TCTGGGGCGT GCGCATCAAC
GAGTCACAGG ATTCCCACGA CTTCTACGCG AAGACCAACC GGCTTGCGCG CGAGCTCGAT
CCGACGCGGC AGACCGGCGG CGTTCGTTAC ATCACCGACA GCGAGTTTCT GGAAGATGTC
TACACGATGA ACGACTTCAT CCTCGGCAAC GAGGAACTGC CGGGCTCGAA CCGCCCGCGC
ACGGCGCTCC GCCCGCAGCA GGAATGCACC GGGCTTTCCC GTAAGGTGCC CTATCTCATC
ACCGAGTTCG GCGGCCATAT GTATCCGACG AAGATCTACG ATCAGGAGCA GCGGCAGGCC
GAACACGTGC GACGGCATCT GGAGGTGCTG AACGCCGCCT ATGGCGATCC GAGCATTTCC
GGCGCGATCG GCTGGTGCAT GTTCGACTAC AACACTCATA AGGATTTCGG CTCCGGCGAC
CGCATCTGCT ATCACGGCGT CATGGACATG TTCCGTGAAC CGAAATTCGC AGCCTATGTC
TATGCCAGCC AATGCGATCC GTCCGAAGAA GTGGTGATGA AGCCCGTCAC TTTCTGGGCG
CGCGGCGAGC GCAATATAGG TGGCGTCCTC CCCCTGATCG TGCTGACGAA TTGCGATGAG
GTGGAACTGA AATACGGTTC GCTCGTAAAG CGTATCGGCC CGGACCGGGA AAACTATCCT
CATTTGCCGC ACCCGCCCGT CGTGATCGAT CACCGTCACT TCACCAAGGA CGAGCTCGGC
GTCTGGGGCA TGAAGTGGGA AAGCGCTGAA TTTACCGGCT TCATCGACGG CAAGCCGGTC
GCCGGTCGCC GCATGGTCGC CGACCCCGTT CCGACGACAC TCGAGATCGA GGCGGACGGA
AAGACGCTTC GCGCCGGAGG CCGCGACAGC ATCCGCATCA TGCTGCGCGC GCTCGACCAG
GCCGGCAACG TCCTGCCCTT CCTGAACGAT GCCGTGGCTA TCGAGGTGCA TGGTCCGGCG
CGGGTCGTCG GTCCTACGCG CCTCGTCTTC CAAGGCGGCT CCACCGGCTT CTGGCTGGAG
TCGACGGGAG CCGCCGGCGC CATCGTCGTT ACCGCGGTTT CGTCGCGTCT CGGCGGGGTG
AAGCTCGAGC TCGTCGCCAT GGCGGAAGGA GAGTGGAACG CATGA
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| Protein sequence | MRSVTSFNDS WVFSAGFTAA DAGTLQAGQP IRLPHNAIEL PFNYFDETCY QRAFTYQKVL
AWRPDFSGRE VSLVFDAAMA DAVVYLNGEE IVAHKDGYTP IEARLTGRLR EGDNLITVKI
DGSENPEIPP FGGRIDYLTF AGIYRDVWLK ITDPVSIANI KIETRDVLSD ARTVSVRCDL
ANPQGLSFTG AVSALLKDAA GDVLAEVAGE TAGGGVTVQM DGLKGLSLWD IDDPVLYEVE
VELRTGRGSD RVAAHFGFRT AEFTNEGFRL NGRLLKIRGL NRHQSFPYVG YAMGRTAQER
DAEIMKHTLH CNLVRTSHYP QSKWFLDHCD RIGLLVFEEI PGWQHIGGEA WKEEAILNVA
RMIERDWNHP SIVIWGVRIN ESQDSHDFYA KTNRLARELD PTRQTGGVRY ITDSEFLEDV
YTMNDFILGN EELPGSNRPR TALRPQQECT GLSRKVPYLI TEFGGHMYPT KIYDQEQRQA
EHVRRHLEVL NAAYGDPSIS GAIGWCMFDY NTHKDFGSGD RICYHGVMDM FREPKFAAYV
YASQCDPSEE VVMKPVTFWA RGERNIGGVL PLIVLTNCDE VELKYGSLVK RIGPDRENYP
HLPHPPVVID HRHFTKDELG VWGMKWESAE FTGFIDGKPV AGRRMVADPV PTTLEIEADG
KTLRAGGRDS IRIMLRALDQ AGNVLPFLND AVAIEVHGPA RVVGPTRLVF QGGSTGFWLE
STGAAGAIVV TAVSSRLGGV KLELVAMAEG EWNA
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