Gene Smed_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4093 
Symbol 
ID5318908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp555788 
End bp556936 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID640775900 
Producthypothetical protein 
Protein accessionYP_001312833 
Protein GI150376237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATG AATTTCCAGA TCCGCTCGAC CCGGCGCTGC TGCCGGCACT GATGACCGCC 
GAAGACGCGC TTGCCCGGCT GGACGAGCGG ACAGGTCGTC ATGCGGTCGC CGCGGGGTTC
AGGGAGCGCG GCCAGTTTTT CGATGCGACG GCTGCCCTTT GGGTGGCCGG AGAACTCGTC
CATGTCGAGG ATCTCGTTCT GCACGATTCG CATATGGATG CGCGCGCGCC CTCGCACGAA
CTGACGATTG CGCATGCGGT GCTAAGGGCG AGGCGACGCC TGGAGCTGGC CGATGCCGAT
TGGGCATTTT CAACGTCTGG ATTAAGTGCC TTGAGAGGCG AGGGAGGGGC GGTCCCCAAT
TATGAACCTC GTGAACGCTC GGATCCCGAG GGGGAAGCGA ATCCGACGGA TGCACCGGAC
GACCCGATGG ACGGTTCCCT CTCCGACGCG TTCGCGGAGA TCGATGCCGC AATCGCCAGG
TCCGAGCGGC TGCTGGAGAT TCACGCTGGA AGCGTGACGG AGGCCGATAG TGCCGCTGTC
GAATTGCAGA CCTCTAGAAT GGAGCCGACG GGCCAGCTTG GCCTGCTTTT CGACGAGGAA
TGGGATGAGG CCGCTCGGCT GGATGCCTGG CGCGCCGTGC TGCCGGTCGC CGACCAATTG
CCCGCCACTC TTGGGGCCGC CGTTCTTTTC GATGCATGGG AACGTATCGA ACCACTGCGC
CGGCAGCATT GGCTAGGCTC GCTCCTCGTC GGCGCCTATC TGCGCCTTCG CGGCAAGGTA
GATTCGCACG TGCTTGCCTA CAATACTGGC CTGAAGACAA TCCGTCATGA ACGACGGCGT
TCGAAAGACC GGCTGACGCG TCTTGCCGGC TTTCTGGAAG CCATGTCTGC CGCAGCAGAG
CTCGGAATGA AGGAGCTCGA TCGCCTGTCG CTTGCCAAAA CGCAGATGGA AATGCGGATC
AGGGACCGCC GTTCGAACAG CAATCTTCCA GGACTGATCG ACCTCGTGCT GTCGAGGCCA
ATCGTCTCCG GTCCTTTGAT CGCGCGCCAT CTGGGTATCA CGCCTCGCGG CGCGCTCAAT
CTCGTGCGCG AACTTGGGGT GCGAGAGATG ACGGGCAGGG GACGTTATCG CGGGTGGGGT
GTCCTCTGA
 
Protein sequence
MRYEFPDPLD PALLPALMTA EDALARLDER TGRHAVAAGF RERGQFFDAT AALWVAGELV 
HVEDLVLHDS HMDARAPSHE LTIAHAVLRA RRRLELADAD WAFSTSGLSA LRGEGGAVPN
YEPRERSDPE GEANPTDAPD DPMDGSLSDA FAEIDAAIAR SERLLEIHAG SVTEADSAAV
ELQTSRMEPT GQLGLLFDEE WDEAARLDAW RAVLPVADQL PATLGAAVLF DAWERIEPLR
RQHWLGSLLV GAYLRLRGKV DSHVLAYNTG LKTIRHERRR SKDRLTRLAG FLEAMSAAAE
LGMKELDRLS LAKTQMEMRI RDRRSNSNLP GLIDLVLSRP IVSGPLIARH LGITPRGALN
LVRELGVREM TGRGRYRGWG VL