| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4087 |
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| Symbol | |
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| ID | 5317906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 548997 |
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| End bp | 549584 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775894 |
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| Product | UbiC transcription regulator-associated domain-containing protein |
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| Protein accession | YP_001312827 |
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| Protein GI | 150376231 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.489248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGA ACAAGGCCTT GAGCGAACTC GTGAAGCGGG GACTGATCGA GCGGCGGCGC
AAATCCGGGA GCTATGTCAG TTTTCCGCAA GCCCAATCCG CGGTGATGGA GATCCACGAA
GTCAAGCGGG AGGTGCAGTC GCTCGGGCTC GATTACGCCT ACCGGCTCGG CGAGAGGGTG
GTGCGCAAGA TGACTTCCGG CGACAAGGGG CGCATCGATC TGCCGGGATC GTCACGGCTT
CTCGACATTA CCTGCAGCCA TTTCGCCGGC GGGCGCGTCT TTTGTCTCGA AGAGCGCCTG
ATCAACCTTT CGGCGGTACC GGAAGCCGAG ACCGAGACGT TCGAGGCCGC CGCCCCAGGC
TCGTGGCTGC TTGGAAAGGT GCCCTGGAGC ACGGCGGAAC ATCGCATCAG GGCCGTTGCG
GCAAGCCGTA CGACGGCGCA GGCGCTCGAA ATTGCTATCG GTGCGGCCTG CCTTGTCATC
GAGCGCCGGA CTTGGAGCGG CGGCGTACCG GTGACGAGCG TGCTGCTCAC CTATCCGGGC
GACCGCCACG AGCTCATCGC CGAATTCGCA CCCAGCGCGA CCGCTTAG
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| Protein sequence | MTVNKALSEL VKRGLIERRR KSGSYVSFPQ AQSAVMEIHE VKREVQSLGL DYAYRLGERV
VRKMTSGDKG RIDLPGSSRL LDITCSHFAG GRVFCLEERL INLSAVPEAE TETFEAAAPG
SWLLGKVPWS TAEHRIRAVA ASRTTAQALE IAIGAACLVI ERRTWSGGVP VTSVLLTYPG
DRHELIAEFA PSATA
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