| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4058 |
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| Symbol | |
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| ID | 5318881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 517850 |
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| End bp | 521068 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775865 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_001312798 |
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| Protein GI | 150376202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.402749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA TCAACGGCAC TTCTGGAAAC AATATTCTCA TCGGCACGGG TTCGGACGAC
AGCCTCAATG GTTTAGCCGG CGACGACCTG CTTCAGGGAC TTGGAGGCGC AGACATCATC
AATGGCGGCG CGGGTGTGGA CACGGCCGAC TATCGCGAGA AGGCGGCCCC AATCGTAGTC
ACATTGACCG GTGCGACGGC GGCGACCGTC TTTATCAATG GCGTCGCGGA GGACACGCTT
GCCAACGTAG AGAACGTTTA CGGGGGCTCC GGCGACGACT TTATCACCGG CGACGCGCTG
AACAATCTCT TCCGGGGAGG CGGCGGAAAC GACGTGCTCG ACGGCGGCGG CGGGAATGAT
ACGGCCGACT ATACCGACAA GACAGCCTCC GTCGTGGTCA CGCTGGCCGG GGCGACACCT
GTGACAGTTT TCGTGAACGG CATCGCCGAG GACATGATCA GCAACTTCGA AAACGTCTAT
GGCGGTTCGG GCGACGACAT CCTAACGGGC GATGATCGGG ACAACATTCT TCGCGGTGAG
GTAGGAAACG ACATTCTCAA TGGCGGCATT GGCGCCGATT CCCTGTTCGG TGGCGAGGGC
AACGATACCG TCGATGGCGG CAACGGGGTC GACACCTTCG ACCTGCGCGA AAAGACATCC
TCCGTCCTCG TGCAGCTCAA TGGTGCGAAT GGAGCTACAG TCTTCGTCGG CGGCGTTGCG
GAGGATACGA TCCGCAACGT CGAGAACATC GTAGGTGGAT CGGCAGGCGA TACGCTTACC
GGCGATGCCG CCGCCAACAA GCTCTCGGGT GCGCGCGGCA ACGACTGGCT CATGGGCGGC
AGCGGTGCCG ACATACTGGA CGGCGGCGAG GACAGCGATA CGGCGGACTA CAGCGACAAG
CAGGCTGCCA TCGTCGTGGC GCTGAATGGC GGCAATCCCG TCACAGTGAC AGTCGGCGGC
CTTGCCGAGG ACTCGATCGC CAAGATCGAA AACATCGTCG GGGGTTCGGG AGACGATACG
CTCAGCGGCG ATGCCGCTGC CAACACGTTT CGCGGTGGTC TTGGCGCCGA CGCGCTTGAC
GGCGGCTCCG GCAGCGATAC CGCGGACTTC AGCGACAAGG CGCAATCCGT CGTGCTTGCC
CTCAACGGAG CGATCGATGC CGTTGCGACC GTCGGCGGAA CGGCGGAGGA CTCGGTCCGA
AACATCGAAA ACATCATCGG CGGTGCGGGA AACGATCAGC TCACGGGCGA TGCCGCCGCC
AATATGTTCC GTGGCGGCCT CGGCGCCGAT GTGCTGGATG GCGCTGCCGG CAGCGACACG
GCGGACTTCA GCGACAAGAC GTCATCGCTT GTCGTAACTC TGGCCGGCGC GAGCCCGGCA
ACGGTCCTCG TCGGCGGCAT CGCGGAGGAT ACGCTGCGCA ACATCGAGAA CATCATCGGC
GGTTCGGGCA ACGACGTGTT CGTTGGCGAC GGCTTGCAGA ACGTGTTCGA TGGCGGGGCG
GGTACCGACA CGGCCGACTA TTCGGCCTCG GCGAAGGCGA TCGCTGTAAC GCTCAACGGC
GCCATTGACG CGAGGGTGTT CATAGGCAAC GCGGCCGAGG ACACGTTGCG CAACGTCGAA
AGCATCACTG GAAGCGCCCT GGCGGATGTG ATCACCGGCG ATGCGCTGGC AAACAGCCTC
CTCGGAGGCG GCGGCGCCGA CCTGCTAAAG GGGGGCGGCG GCCAGGACGT TGTGGATGGC
GGCAGCGGAT CAGACACCAT AGACTTCGGC GACAAGACCG CTGCCGTCGT CCTGACCCTT
GCGGGTGTGG CTAATACGAC AGCCACTGTC GGCGGGGTGG CCGAGGACAC GGTCCGCAAT
ATCGAGAACA TCTTCGGAGG CGCCGGCGCC GACGTGCTGA CAGGCGACGG CAACAGCAAC
ACAATCCGCG GCGGGGCCGG GGCAGACGGC CTGGACGGCG GCGCGGGGGT CGATACGGCC
GATTATCGGG ACAAGGTGAC GTCGGTTGTC GTCACGCTCA GTGGCGCGAA TGCCGCGCTT
GTCAAGGTGG GCGGCCTTAA CGAAGATACG ATCCGCAACT TCGAAAACGT TGCAGGCGGT
TCGGCCGGCG ACACGCTTGT CGGCGACGAC CTGGCCAATG TGCTGCTTGG CAATGACGGT
GCCGATACGC TGAAAGGCGG CTTGGGCAGT GACGTGCTGG ATGGCGGCAA TGGCATCGAC
ACTGCGGATT ACCTCGAGAA AGCCGACGCG ATCTCCGTCA CGCTCAACGG GACCACGAAC
GCGACGGTCT TGGTCGGCGG AGTTGCGGAA GACGTCATTC GCGGTGTAGA AAACATATTG
GCGGGGTCCG GTGCCGACAC ACTTGTCGGC GATGGCGCGA GCAACACGTT TCGTGGAGCG
CTCGGCGCTG ACTTCATCGA TGGCGGGGCG GGGTCCGATA CGGCCGATTA TCGCGAGAAG
GCGGCGGCTG TCGATGTGAC CCTCTTCGGC GCCGGTGACA GCTTCGTCTT CGTCGGCGGG
GTCGCGGAAG ACACAATCCG AAACATTGAA AACGTATTCG GCGGCAAGGG CAACGATACG
CTGACGGGCG ACGACTCCGC CAACACCCTC AATGGCAATG ACGGCAAGGA TTTGCTTACC
GGCGGCGGCG GAGCGGACAT TCTTGACGGT GGGGCGGCCT CCGACACGGC GAACTACCGC
GACAAGAGTG CATCGGTTTC CGTCACCCTC AACGGTGCCG CCTCCACGGC TGTCATGGTC
GGCGGGGTGG CCGAGGATAC GGTCCGCAAT ATCGAGAACG TCTGGGGCGG GACCGGCAAT
GACAGCCTGA GCGGCGACGG CAATGCAAAT CTGCTGTCGG GCGGCGGCGG AAGCGACATG
CTGTCCGGCG GCGCGGGGGC GGATATTTTC CAGTTCGACT TCGCTTTGGG AGCGAGCAAT
GTCGACATGG TTCTGGATTT TACCGCCGGA GACCGGCTCT TTCTGTCGAA GAGCGTTTTC
ACCAGCCTGA GCGGCGGTTC GCTGGCAAGC AACCAGTTCT ACGCGGCGGC CGGCGCAACG
GAGGCGCAAG GCGTGAACCA AAGAGTCGTT TACGATACGA CGACGGGCGC GCTCTACTAT
GATGCTGACG GCAACCTTTC GGGGCATACG GCCGTGCAGT TTGCAGTCCT CTCTACACAG
CCGGGACTGA CTGCAGGAGA TTTCGTGCTC GTCGTGTGA
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| Protein sequence | MAVINGTSGN NILIGTGSDD SLNGLAGDDL LQGLGGADII NGGAGVDTAD YREKAAPIVV
TLTGATAATV FINGVAEDTL ANVENVYGGS GDDFITGDAL NNLFRGGGGN DVLDGGGGND
TADYTDKTAS VVVTLAGATP VTVFVNGIAE DMISNFENVY GGSGDDILTG DDRDNILRGE
VGNDILNGGI GADSLFGGEG NDTVDGGNGV DTFDLREKTS SVLVQLNGAN GATVFVGGVA
EDTIRNVENI VGGSAGDTLT GDAAANKLSG ARGNDWLMGG SGADILDGGE DSDTADYSDK
QAAIVVALNG GNPVTVTVGG LAEDSIAKIE NIVGGSGDDT LSGDAAANTF RGGLGADALD
GGSGSDTADF SDKAQSVVLA LNGAIDAVAT VGGTAEDSVR NIENIIGGAG NDQLTGDAAA
NMFRGGLGAD VLDGAAGSDT ADFSDKTSSL VVTLAGASPA TVLVGGIAED TLRNIENIIG
GSGNDVFVGD GLQNVFDGGA GTDTADYSAS AKAIAVTLNG AIDARVFIGN AAEDTLRNVE
SITGSALADV ITGDALANSL LGGGGADLLK GGGGQDVVDG GSGSDTIDFG DKTAAVVLTL
AGVANTTATV GGVAEDTVRN IENIFGGAGA DVLTGDGNSN TIRGGAGADG LDGGAGVDTA
DYRDKVTSVV VTLSGANAAL VKVGGLNEDT IRNFENVAGG SAGDTLVGDD LANVLLGNDG
ADTLKGGLGS DVLDGGNGID TADYLEKADA ISVTLNGTTN ATVLVGGVAE DVIRGVENIL
AGSGADTLVG DGASNTFRGA LGADFIDGGA GSDTADYREK AAAVDVTLFG AGDSFVFVGG
VAEDTIRNIE NVFGGKGNDT LTGDDSANTL NGNDGKDLLT GGGGADILDG GAASDTANYR
DKSASVSVTL NGAASTAVMV GGVAEDTVRN IENVWGGTGN DSLSGDGNAN LLSGGGGSDM
LSGGAGADIF QFDFALGASN VDMVLDFTAG DRLFLSKSVF TSLSGGSLAS NQFYAAAGAT
EAQGVNQRVV YDTTTGALYY DADGNLSGHT AVQFAVLSTQ PGLTAGDFVL VV
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