Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4014 |
Symbol | |
ID | 5318823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 470282 |
End bp | 471484 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775822 |
Product | cystathionine gamma-synthase |
Protein accession | YP_001312755 |
Protein GI | 150376159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCCA AAGAGCTCGA TTTTGCAAGC CAAGCCGTAT TCTACACGCC GGAAGAACAT TCCCAGTCGA TCAGCTATCC GATCTACATG TCGGCGAATT TCCAGTATGA CGGAGACATC TACGATCAGA TCGTTGCCGG CGCGCGCAAG GAAGTGAACA TCTATTCACG CTGCGGCAAT CCGACGGAAT ACAAGTTCGA AGAACACATC GCCAAGCTCA CCGGCGGCAC GGCCTGCCTG GCGACCGCGT CCGGAATGGC GGCCATCTCG CATGCCTTGT TCGGCATCCT CAAGGCGGGC GATCACATCG TCGCCGATCT GACGACCTAT TCGAGCACAC ACGAATTCTT CGATCACCGC GCCCAGGATT TCGGACTGAA GGTGAGCCTG GTGGATTGCA CCGACGTGAG GGCGGTCGAG AACGCGCTTA CGGAAGAAAC GAAGGTGCTC TACGTCGAGG CCATTGCCAA TCCGACGATG AAGGTGCCGC CCCTGAAGGC GCTCGTGGAG CTGGCACATG CGCGCGGCAT CGTGGTGATC TGCGACAATA CCTTCGCGTC GCCGGCAGTC TGCCGCCCGC ATGATTTCGG CGTCGACGTG GTCGTAGAGA GCGCGACCAA GTTCATCGGC GGGCATAATG ACGCGGTGGG CGGGGTTATC ACGTTGAAAT CCGATATCCT GCCGCCGGAC TGGCTCGAAG ACGTGCGTTG GAACACGCTC AACAAACTGG GCGCCCCGCT TTCGCCCTTC AATGCATGGC TGCTTTTGCG CGGCGCGCAG ACCCTGGCGC TGCGGCTGGA GAAGCAATGC GCAAATGCGC TGGCGCTCGC GAAGCATCTC GAGGCCCATC CGAGGGTCAG GCGCGTGTTC TATCCGGGCC TGCCTTCGCA CCCGAACTAC GCATCCGCCA AGGAGCAGTT GCGCGGCGGC GGCGCAATGC TCTCGTTCCA GGTTGATGAC GAAGCGTCCG GTGTCCGGCT TCTAAAGCGT TTGCAGCTTT GTTCCTTCGC CGCGAGCCTC GGGGGGCTCA GAACGACGAC GCAGGTGCCC GCCACCATGG CCTTCCTGGA TATTCCGAGC CAGGAAAGGG AGGCGATGGG CGTCGTCGAC GGTCTCGTGC GCTTTTCGGT CGGCATCGAG CATATCGACG ACATCATCGC CGATGTGGAT AGTGCGATAG ACCAGATGCA TATGGAGATC TAA
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Protein sequence | MSPKELDFAS QAVFYTPEEH SQSISYPIYM SANFQYDGDI YDQIVAGARK EVNIYSRCGN PTEYKFEEHI AKLTGGTACL ATASGMAAIS HALFGILKAG DHIVADLTTY SSTHEFFDHR AQDFGLKVSL VDCTDVRAVE NALTEETKVL YVEAIANPTM KVPPLKALVE LAHARGIVVI CDNTFASPAV CRPHDFGVDV VVESATKFIG GHNDAVGGVI TLKSDILPPD WLEDVRWNTL NKLGAPLSPF NAWLLLRGAQ TLALRLEKQC ANALALAKHL EAHPRVRRVF YPGLPSHPNY ASAKEQLRGG GAMLSFQVDD EASGVRLLKR LQLCSFAASL GGLRTTTQVP ATMAFLDIPS QEREAMGVVD GLVRFSVGIE HIDDIIADVD SAIDQMHMEI
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