| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4008 |
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| Symbol | |
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| ID | 5318288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 463573 |
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| End bp | 464556 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640775816 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001312749 |
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| Protein GI | 150376153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTA CCAGAAGAGG CTGTTTGGCA TCGGCGGTCG CAGCGGCCGC ACTCATTGCC
GCGGGGTCGG CACTCGCCGA GGGTGCACCG TTCAAGATGG GATTGCTTGT CCCCGGAAGC
GTCTCGGAGG AGGGGTGGAA CAGGATCGGG TTCAACGCCC TCAAAGGCGT GGAGGCTGAA
CTCGGTGCCG AGGTGAGCTA TGTCGAGCTT CAGCAGAACC CCGCATCCTT CGAGAAAGCC
TTCCACGACT TCGCCAGCCA GGGCTACAAC GTCATTCTCG GGCACGGCTT CGAGTTTCAG
GACGCCGCAC TCGCGGTTGC GCCTGAATAT CCCGATACGG TCTTTCTCAT TTCCTCGAGC
TACATATCCG AGGGCAATGT CATCGGGCTC AACACGGATA CGAGCCAACC CTTCTATCTG
ATGGGTGTGA TCGCGGCCAA GACGGGCAAG AAGGCGGGTC TCGTCGGAGG CATGGAGATT
CCACCGATCA AGGAGGCCTT CGAAGGATTT ACCAATGGCG TGCGAAGCGT CGCGCCGGAC
TTTCCGATCA GCGAAGTCTA CATCGGCAAT TTCACCGATG CGACAGCGAC CAAGGAAGCG
AGCCTCAGCC TGATCTCGCA AGGGGCGGAC TTTGTCCTGC CGAACGCGTC AGGAGCGACG
GTTGGCGGAT TCCAGGCCGC CGCGGAATCG GGCGAAAACG TCAAGACCTT CAGCATCTTC
AGCGACTTCA CATCGGTTGC TCCCAAGAAC ATCCTCGGCC TTTACATCGC CGATTATGCC
CGTGGGGTCA TCCGGATCGT CGGGGACATA AAGAATGGCA AAAAGCCGAC GACCAATGTC
GAATTCGGTC TGAAAGATGC CGACGTCATG CAATTCACCT ATAACGACCA GGCTGCAAAT
CCGGTGACGG AGAACGTTCG AAAATACGTC GATGAGGTGA AGGCCAAGAT CGCAGCCGGA
GAAATCAAGA CCCGGCAGAA ATAA
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| Protein sequence | MMITRRGCLA SAVAAAALIA AGSALAEGAP FKMGLLVPGS VSEEGWNRIG FNALKGVEAE
LGAEVSYVEL QQNPASFEKA FHDFASQGYN VILGHGFEFQ DAALAVAPEY PDTVFLISSS
YISEGNVIGL NTDTSQPFYL MGVIAAKTGK KAGLVGGMEI PPIKEAFEGF TNGVRSVAPD
FPISEVYIGN FTDATATKEA SLSLISQGAD FVLPNASGAT VGGFQAAAES GENVKTFSIF
SDFTSVAPKN ILGLYIADYA RGVIRIVGDI KNGKKPTTNV EFGLKDADVM QFTYNDQAAN
PVTENVRKYV DEVKAKIAAG EIKTRQK
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