| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3985 |
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| Symbol | |
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| ID | 5317911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 436358 |
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| End bp | 437857 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775793 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312726 |
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| Protein GI | 150376130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT CGCTGCTTTT GGGAGTCCTC ATGCTGGGCT CCGCCCTATC CCCCGCTTTC
GGGGAATCGG GACCGATCAA GATCGTCCTA CCGGAAGAGG CAGATCTGCT TGAGCCTTGC
ATGGCCACGC GTTCCAATAT CGGCCGCATC ATCATGCAGA ACGTCAGCGA GACGCTGACC
GAGCTTGACG TTCGCGGCGG CAAGGGCCTG ATGCCGCGTC TGGCGGAAAG CTGGGAGCAG
AAGGAGGATG GCAGCTGGCG CTTCAACTTG CGCAAGGGCG TCAAGTTCTC CGACGGCACC
GACTTCAACG CCAAAGACGT CAAGTACAGC TTCGACCGCG TGATGAGCGA CAAGAACGCC
TGCGAGTCGC GCCGCTACTT CGGCGGCATG AACATCAAGA TCGACGTCGT CGATGACGCC
ACCATCGATT TCACCGTCGA TCCCGTTCAG CCCATCCTGC CGCTTCTCCT GTCGTTGCTG
ACGATCGTAC CGGAAGAGAC TCCGATGGAA TTCGTTCGCG AGCCTGTCGG GACCGGCCCC
TACGAGCTGA CTGACTGGAC GCCCGGCCAG CAGATCGTGC TCACTGCCCG CGACGACTAC
TGGGGCGAGA AGCCGGAGGT CACCGAGGCC ACCTATCTGT TCCGCTCCGA TCCTGCGGTC
CGCGCCGCAA TGGTCCAGAC GGGTGAAGCA GACCTTTCGC CCTCCATATC GCAGACCGAG
GCCACGAATC CTGCCACGGA TTTCTCCTAT CTCGACAGTG AGACCGTTTA CCTGCGCATC
GATCACAATA TCGAGCCGCT GAACGATGTC CGCGTGCGCC GCGCTCTGAA CCTTGCTATC
GACCGCGAAG CTTTCCTCGG GACGCTGGTG CCCGACAGCG CCGTTCTTGC CACCGCTATC
GTTCCGCCGC CGACGCTCGG CTGGAACCCG GACGTCAAGG TCTTCCCCTA TGATCCCGAT
CAGGCAAAGA AGCTCATCGA GGAAGCCAAG GCCGACGGCG TCAAGGTGGA CACGCCGATC
ACCATCATCG CGCGCACGGC GAACTTCCCG AACGTGACCG AAATCATGGA GGCTATCCAG
GCGCAGTTGC AGGAGGTCGG GCTTCAGGTC GAGCTCAAGT TCGTTGAGGT CGCCGAGCAT
GAGGTCTATT ATTCAAAGCC TTTCAAGGAC GGGCGCGGCC CGCAGCTCGT TGCGGCGATG
CACGACAACT CGAAGGGCGA TCCCTCCTTC TCGATGTTCT TCAAATACGA CTCCGAAGGC
ACGCAGTCGG GCTTTGCCGA TCCGAAGGTC GACGACCTGA TCGCCCGAGC AAATGCAGCC
GTCGGTGACG AACGCGCAAA GCTCTGGTCC GAGCTCATCG CCTATGTGCA CGACGAGGTG
GTGGCAGATG TGCTTCTGTT CCACATGGTC GGCTTCTCGC GGGTATCGGA GCGGCTGGAC
TTCAAGCCGA CAATGGCGAC GAATTCCATG CTGCAGCTCT CCGAGATCAA GATCAAATGA
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| Protein sequence | MKRSLLLGVL MLGSALSPAF GESGPIKIVL PEEADLLEPC MATRSNIGRI IMQNVSETLT
ELDVRGGKGL MPRLAESWEQ KEDGSWRFNL RKGVKFSDGT DFNAKDVKYS FDRVMSDKNA
CESRRYFGGM NIKIDVVDDA TIDFTVDPVQ PILPLLLSLL TIVPEETPME FVREPVGTGP
YELTDWTPGQ QIVLTARDDY WGEKPEVTEA TYLFRSDPAV RAAMVQTGEA DLSPSISQTE
ATNPATDFSY LDSETVYLRI DHNIEPLNDV RVRRALNLAI DREAFLGTLV PDSAVLATAI
VPPPTLGWNP DVKVFPYDPD QAKKLIEEAK ADGVKVDTPI TIIARTANFP NVTEIMEAIQ
AQLQEVGLQV ELKFVEVAEH EVYYSKPFKD GRGPQLVAAM HDNSKGDPSF SMFFKYDSEG
TQSGFADPKV DDLIARANAA VGDERAKLWS ELIAYVHDEV VADVLLFHMV GFSRVSERLD
FKPTMATNSM LQLSEIKIK
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