Gene Smed_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3968 
Symbol 
ID5319066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp418829 
End bp419689 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID640775777 
Productinositol-phosphate phosphatase 
Protein accessionYP_001312710 
Protein GI150376114 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGAC AGTTTTTTTC GGATGACCTC CATGGTCGCG CAGAACTGTG CCGTGACGTC 
ATCCGTTCCG CCGGCGCATT GGTGCTCAGA GGGTTTCTGG GCAATGGGAG ACGAAGCGTC
TCCATGAAAG GCCCCCAAGA CTTCCTCACA GAAGTGGATG CGGCCTCCGA GGCGCATATC
CGTTGCGCGC TCGCCGCGCA TTTTCCGGAA GACAGTTTCT TCGGCGAAGA GGGTGGGGGA
GCGATAAGCG AGCGGGTCTG GGTTGTCGAC CCCATCGACG GCACGGCGAA TTATGCACGG
GGCATTCCGC ATTTCTGCAT CTCGATCGCC TTTGTCCAGA GCGGGTCTAC CGAAATCGCC
GCGATCTACA ATCCGGCGCA GGACGAACTC TATTTCGCGC GACGCGGACA AGGCGCGACG
CGGAACGGGG TTCCGATCCA CGTCGCGCAA ACGGCCCGCT TCGATGCCGC GTCTCTGGAA
ATGGGCTGGT CGATGCGCGT GCCGAACACG GCATATCTCG GCGTGATGGA AGCGCTGCTC
GGCATGGGGG CAAATGTTCG CCGGGCCGGT TCCGGCGCAT TGGCCCTTGC ATATGTCGCC
GATGGCCGCT CGGACGGCTA TATCGAACTG CATATGAATT CCTGGGATTG CCTTGCCGGC
CTGCTACTCG TGAGCGAAGC GGGCGGGGTG GTCTGTCCCT ATCTTGAAAT CGGCAGCCTG
GACGCCGGGG GACCGGCTCT TGCCGTGGCG CCGGCTCTTG CTTCGGAGAC GAGCCGCGCC
TCGAATATAC CGTTGGACGC AGCGGTGATT CCTGCCTGCC GGCAGACGGC TCCGGCCTGT
CCGGCAACCT TCGTGGATTG A
 
Protein sequence
MDRQFFSDDL HGRAELCRDV IRSAGALVLR GFLGNGRRSV SMKGPQDFLT EVDAASEAHI 
RCALAAHFPE DSFFGEEGGG AISERVWVVD PIDGTANYAR GIPHFCISIA FVQSGSTEIA
AIYNPAQDEL YFARRGQGAT RNGVPIHVAQ TARFDAASLE MGWSMRVPNT AYLGVMEALL
GMGANVRRAG SGALALAYVA DGRSDGYIEL HMNSWDCLAG LLLVSEAGGV VCPYLEIGSL
DAGGPALAVA PALASETSRA SNIPLDAAVI PACRQTAPAC PATFVD