Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3949 |
Symbol | |
ID | 5318057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 398915 |
End bp | 399727 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775759 |
Product | sulphur oxidation protein SoxZ |
Protein accession | YP_001312692 |
Protein GI | 150376096 |
COG category | [S] Function unknown |
COG ID | [COG5501] Predicted secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA TTCTCGCGCT TATTCCCGTC ATGCTGACGG CAAATCTCGC ACTTGCCGAG CCGGAGAAGC CGGACAACCC GCTTGCAGAC GGTACGACCT GGCATGACTT GAAAGGCGAC ATCGTCGGAG AGGCGGCCAT CCTCGACGGC ACGGCCCTGT TCTCCGTCGC GGCGCCCTAC CGTGCCAACG ACGCCGCGAC GGTGCCCATC ACGATCGAGC AGACGGACGC GGCGGCGGGG CCGATCAAAT CGCTCAAGCT GGTGATCGAC GAGAATCCGG CGCCGGTTGC GGCGGAAATT CGCTTCGGCC CGACGATGGC ACCGCTGAAA TTCGAAACCC GCGTGCGCGT CAACCAGTAC TCCAACATCC GTGCGATCGC CGAAACGCCA CAGGGCATTT TCATGAATGG CCGCTTCGTC AAGGCATCCG GCGGCTGCTC GGCGCCCGCT ACGAAGGATC CGGTCGCGGC TCTGAAGGGC ATGGGAGAGA TGCGGCTGAA GCTCTTCGGC GGCGAGGGTA AAGTACAAAA ACCCCGCCGC GAGGCGCAGA TCATGATCCG GCATCCGAAC TATTCCGGTC TCCAGCGGGA CCAGATCACT CAACTCTTCG TCGGTGCCAA GTTCATCTCC GAACTGGTGG TGAAGCAGGG AGATGAGCTT TTGTTCGCGC TCGACGGCGG GATATCGATC AGTGAAAATC CTGTGTTCCG CTTCAGCTAT ACCGACAATG GGGCCCCGGA CTTCACGGTC CATGCGGTCG ATACGGACGG CAATGTCTTC GACCGCGTCC TGCCGAAGAC GCCACCCGCC TGA
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Protein sequence | MKLILALIPV MLTANLALAE PEKPDNPLAD GTTWHDLKGD IVGEAAILDG TALFSVAAPY RANDAATVPI TIEQTDAAAG PIKSLKLVID ENPAPVAAEI RFGPTMAPLK FETRVRVNQY SNIRAIAETP QGIFMNGRFV KASGGCSAPA TKDPVAALKG MGEMRLKLFG GEGKVQKPRR EAQIMIRHPN YSGLQRDQIT QLFVGAKFIS ELVVKQGDEL LFALDGGISI SENPVFRFSY TDNGAPDFTV HAVDTDGNVF DRVLPKTPPA
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