Gene Smed_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3949 
Symbol 
ID5318057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp398915 
End bp399727 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID640775759 
Productsulphur oxidation protein SoxZ 
Protein accessionYP_001312692 
Protein GI150376096 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA TTCTCGCGCT TATTCCCGTC ATGCTGACGG CAAATCTCGC ACTTGCCGAG 
CCGGAGAAGC CGGACAACCC GCTTGCAGAC GGTACGACCT GGCATGACTT GAAAGGCGAC
ATCGTCGGAG AGGCGGCCAT CCTCGACGGC ACGGCCCTGT TCTCCGTCGC GGCGCCCTAC
CGTGCCAACG ACGCCGCGAC GGTGCCCATC ACGATCGAGC AGACGGACGC GGCGGCGGGG
CCGATCAAAT CGCTCAAGCT GGTGATCGAC GAGAATCCGG CGCCGGTTGC GGCGGAAATT
CGCTTCGGCC CGACGATGGC ACCGCTGAAA TTCGAAACCC GCGTGCGCGT CAACCAGTAC
TCCAACATCC GTGCGATCGC CGAAACGCCA CAGGGCATTT TCATGAATGG CCGCTTCGTC
AAGGCATCCG GCGGCTGCTC GGCGCCCGCT ACGAAGGATC CGGTCGCGGC TCTGAAGGGC
ATGGGAGAGA TGCGGCTGAA GCTCTTCGGC GGCGAGGGTA AAGTACAAAA ACCCCGCCGC
GAGGCGCAGA TCATGATCCG GCATCCGAAC TATTCCGGTC TCCAGCGGGA CCAGATCACT
CAACTCTTCG TCGGTGCCAA GTTCATCTCC GAACTGGTGG TGAAGCAGGG AGATGAGCTT
TTGTTCGCGC TCGACGGCGG GATATCGATC AGTGAAAATC CTGTGTTCCG CTTCAGCTAT
ACCGACAATG GGGCCCCGGA CTTCACGGTC CATGCGGTCG ATACGGACGG CAATGTCTTC
GACCGCGTCC TGCCGAAGAC GCCACCCGCC TGA
 
Protein sequence
MKLILALIPV MLTANLALAE PEKPDNPLAD GTTWHDLKGD IVGEAAILDG TALFSVAAPY 
RANDAATVPI TIEQTDAAAG PIKSLKLVID ENPAPVAAEI RFGPTMAPLK FETRVRVNQY
SNIRAIAETP QGIFMNGRFV KASGGCSAPA TKDPVAALKG MGEMRLKLFG GEGKVQKPRR
EAQIMIRHPN YSGLQRDQIT QLFVGAKFIS ELVVKQGDEL LFALDGGISI SENPVFRFSY
TDNGAPDFTV HAVDTDGNVF DRVLPKTPPA