Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3942 |
Symbol | |
ID | 5318523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 391854 |
End bp | 392381 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640775752 |
Product | putative cytochrome c protein |
Protein accession | YP_001312685 |
Protein GI | 150376089 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.104356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAA CAAGACACGC CGTGCCGATG ATCCTCGCCC TGTTCACGCT TATGGCGGGC GCCGCGGGCG CAGAAGAAGC GCCGGACAAT ATCACCGCTG CGCGCGACGA AAACGGGCGC TATTACACCG CCGACGACGT TCCTACTTTC AAGGTCACCG AAGACGGCAC GGTGGACTGG CTGACCTATT CAGGCTTCCG CCGGTACCAC TCGGAATGTC ACGTCTGTCA TGGCCCGGAG GGCGAGGGAT CGAGCTATGC ACCAGCCCTG AAGACCTCTG CAATAAACAT GGACTATTAT GATTTCGTCG ATGTCGTCAC CAACGGACGC AAGAAGGTCA GCGCTGCCGA GAACTCGGTG ATGCCCGCCT TCGGCGAGAA CGTCAATGTG ATGTGTTATC TCGACGACAT CTACGTCTAT CTGAAAGCGC GCGGAGCCGA TGCATTGCCG CGAGGACGTC CGGCCAAGAA GGAAGCGAAA TCCGATGCGA TCAAGGATGC TGAAAAGGCT TGCCTCGGCC ACGAGTAG
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Protein sequence | MTRTRHAVPM ILALFTLMAG AAGAEEAPDN ITAARDENGR YYTADDVPTF KVTEDGTVDW LTYSGFRRYH SECHVCHGPE GEGSSYAPAL KTSAINMDYY DFVDVVTNGR KKVSAAENSV MPAFGENVNV MCYLDDIYVY LKARGADALP RGRPAKKEAK SDAIKDAEKA CLGHE
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