| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3942 |
|---|
| Symbol | |
|---|
| ID | 5318523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 391854 |
|---|
| End bp | 392381 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640775752 |
|---|
| Product | putative cytochrome c protein |
|---|
| Protein accession | YP_001312685 |
|---|
| Protein GI | 150376089 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.104356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAA CAAGACACGC CGTGCCGATG ATCCTCGCCC TGTTCACGCT TATGGCGGGC
GCCGCGGGCG CAGAAGAAGC GCCGGACAAT ATCACCGCTG CGCGCGACGA AAACGGGCGC
TATTACACCG CCGACGACGT TCCTACTTTC AAGGTCACCG AAGACGGCAC GGTGGACTGG
CTGACCTATT CAGGCTTCCG CCGGTACCAC TCGGAATGTC ACGTCTGTCA TGGCCCGGAG
GGCGAGGGAT CGAGCTATGC ACCAGCCCTG AAGACCTCTG CAATAAACAT GGACTATTAT
GATTTCGTCG ATGTCGTCAC CAACGGACGC AAGAAGGTCA GCGCTGCCGA GAACTCGGTG
ATGCCCGCCT TCGGCGAGAA CGTCAATGTG ATGTGTTATC TCGACGACAT CTACGTCTAT
CTGAAAGCGC GCGGAGCCGA TGCATTGCCG CGAGGACGTC CGGCCAAGAA GGAAGCGAAA
TCCGATGCGA TCAAGGATGC TGAAAAGGCT TGCCTCGGCC ACGAGTAG
|
|---|
| Protein sequence | MTRTRHAVPM ILALFTLMAG AAGAEEAPDN ITAARDENGR YYTADDVPTF KVTEDGTVDW
LTYSGFRRYH SECHVCHGPE GEGSSYAPAL KTSAINMDYY DFVDVVTNGR KKVSAAENSV
MPAFGENVNV MCYLDDIYVY LKARGADALP RGRPAKKEAK SDAIKDAEKA CLGHE
|
|---|
| |