Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3938 |
Symbol | |
ID | 5318519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 388528 |
End bp | 389817 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775748 |
Product | hypothetical protein |
Protein accession | YP_001312681 |
Protein GI | 150376085 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.350729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAG CAATTCCAGG AAGGGTGCGC AGCGGTTTTC CGTCCGGAAT TGCCGAGAAA CGGACGGTTC GAGCAACTCC GCGATTCAGA GAAAAGGGGA AGTGCCCTCA CCTATCGGGT CTGCTCGCCC TTTTCTGGGT GGCCATGCTT GTCACCTCTC CCTCGCAGGC GGCGGAGGTG AAGACGGCGG TGCTCAGGAT CGATCGCGTC GTCGGTCCGC CGATCTCGCG GCTCGATGCG CCGCCCGCCG ATCTGGGCTT TGCCGGCGCC ATGCTGGGCA ATGAGGACAA TCGGACGACC GGTGCCTTCA CGGGCATGGA TTACACGGTG ACGACGCAGG CGGTTGCACC GGAAGAGGCA GGGGCGGCGC TCGACGGGCT GAAGGCGGAA GGCATCGGCC TCATCGCCGT GATCGCCGAA GGCGACATCC TGAAGGAACT GTCAGAAAAG GCCGGGCCGG GGGTACTGCT CTTCAACGCC GGCGCGCGCG ACGACGGGTT GCGCGATGCG GACTGCCTGG CGAATGTGCT GCATGTCTCA CCCAGCCGCT CGATGCTCAG CGACAGTATC GTGCAGTTCC TGATGTGGAA GAAATGGCCT CGTATCCTGC TGATCCACGG CTCGCATCCG GAAGACAGGC TGCTGGCCGA AAGCTACCGC AAATCGGCCG CCAAATTCGG CGCGAAGATC GTAGAAGAGC GCGAATTCGT CGATACCGGC GGCAGCCGGC GAACGGATAC CGGCCATGTC ATGGTGCAAA AGCAGATTCC CGTCTTCACA CAGGAAGCCG AGCCCTATGA CGTCATCGTC GCGGCCGACG AAGCAGGCGT CTTCGCGCCC TATCTGCCTT ACCACAGCTG GGATCCGAGG CCCATCGCCG GATCGGCCGG ACTTCGCCCT GTCTCCTGGC ATCCCGCCCA CGAGGCGTGG GGCGCGACCC AGTTCCAGCG CCGCTTTGAG AAGCTTACCG GCCGTTACAT GCGCGAGGAA GACTATCAGG CGTGGCTTGC CATGCGGGTG ATCGGGGAGG CGGTGACCCG CTCCGGCAAG GCCGATCCCG CAACCGTGCG GGCCTATGCC CTTTCGAAGG ACTTCGAACT GGCCGCGTTC AAGGGTCAGA AGCTGACCTT CCGCACCTGG AACGGGCAGC TGCGGCAGCC GGTCCTTCTG ACCGAAGGCC GGGTGACGGT CTCCGTTTCT CCGCAGGACG GTTACCTGCA TCAGCATTCG CCGCTCGACA CGCTGGGCAT CGATGCGCCC GAAACCGCCT GCCAGGCCTT TGGAGGATAA
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Protein sequence | MLEAIPGRVR SGFPSGIAEK RTVRATPRFR EKGKCPHLSG LLALFWVAML VTSPSQAAEV KTAVLRIDRV VGPPISRLDA PPADLGFAGA MLGNEDNRTT GAFTGMDYTV TTQAVAPEEA GAALDGLKAE GIGLIAVIAE GDILKELSEK AGPGVLLFNA GARDDGLRDA DCLANVLHVS PSRSMLSDSI VQFLMWKKWP RILLIHGSHP EDRLLAESYR KSAAKFGAKI VEEREFVDTG GSRRTDTGHV MVQKQIPVFT QEAEPYDVIV AADEAGVFAP YLPYHSWDPR PIAGSAGLRP VSWHPAHEAW GATQFQRRFE KLTGRYMREE DYQAWLAMRV IGEAVTRSGK ADPATVRAYA LSKDFELAAF KGQKLTFRTW NGQLRQPVLL TEGRVTVSVS PQDGYLHQHS PLDTLGIDAP ETACQAFGG
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