| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3918 |
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| Symbol | |
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| ID | 5318703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 369165 |
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| End bp | 370076 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775728 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001312661 |
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| Protein GI | 150376065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAAA CGCCCGATCT TCGAATACTT GTCTTGGGGG CCGCCGCCGG CGGCGGTCTC
CCTCAATGGA ATTGCGGCTG TCCCAACTGC GCGATGGCGC GCGACCCGGG CTCCGGTCTC
AAACCACAGA CCCAGTCCTC GCTTGCAGTG AGCCTCGATG GCGAGGCCTG GGCCGTGTTC
AATGCCTCCC CGGACATCCG CCAGCAAATT CACGCCAATC GCCCGCTGCA GCCGCGCCGT
CTGCGCCACA GCCCTATCGA AAGCGTAGTG TTGACGAATG GCGACATCGA TCATCTGGCA
GGACTTCTCG TCCTGCGGGA GAAGCAGGCA TTCGCCTTGT TTTCGACCGG CGCAGTCGGC
AGAATCGTCG CCGACAATCC GGTCTTTCAG GTCCTCGACC CGGAACTGGT TTCGAAAAGG
ACCATCGAGA TCGAGGAGAC GTTCTCGCCG CTCCAAGGGC TCGGAGCACG GCTCTTCGCC
GTCCCTGGGA AAGTGCCGCT CTTTCTCGAG AATGGCGAGC CGGACCTGGG CCTTGAGGGC
GAGCATACGG TCGGCGTCGA ATTGGCCGCT GCAGGCAAGC GCGTTTACTA CGTTCCCGGT
TGCGCCGTGA TGACGGATGC GCTCGCCGCG CGCCTGCGAA ATGCCGATGC AGTGTTCTTC
GATGGTACGC TCTACAGTGA CGACGAGATG ATTCAAACCG GTATGGGCCG CAAGACCGGC
CGTCGCATGG GCCACATGCC CATCGACGGC GAAGGCGGCA GCCTCGATGC ACTCGGTACC
TTGAACATCC GCAGAAAGAT CTATGTCCAT ATCAACAACA CCAACCCGAT CTGGCGGGCC
GGCAGCGAGC GCGAGCGCGT CGAGGCACAG GGCTTCGAGA TCGGCTACGA CGGAATGGAG
GTCCGGCTGT GA
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| Protein sequence | MNKTPDLRIL VLGAAAGGGL PQWNCGCPNC AMARDPGSGL KPQTQSSLAV SLDGEAWAVF
NASPDIRQQI HANRPLQPRR LRHSPIESVV LTNGDIDHLA GLLVLREKQA FALFSTGAVG
RIVADNPVFQ VLDPELVSKR TIEIEETFSP LQGLGARLFA VPGKVPLFLE NGEPDLGLEG
EHTVGVELAA AGKRVYYVPG CAVMTDALAA RLRNADAVFF DGTLYSDDEM IQTGMGRKTG
RRMGHMPIDG EGGSLDALGT LNIRRKIYVH INNTNPIWRA GSERERVEAQ GFEIGYDGME
VRL
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