| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3917 |
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| Symbol | |
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| ID | 5318702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 368398 |
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| End bp | 369168 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775727 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
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| Protein accession | YP_001312660 |
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| Protein GI | 150376064 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACGG CAGATGACAG ACAAGCTTTC CATGCCCGTC TGCTGGAGAT CGGCAAGCAG
CGCTACCACG ACAAGCATCC GTTTCATGCC ATGCTTCATA GCGGCGGCTG CACGACGACA
CAGGTCCGCG CCTGGGTGAT CAACCGTTAC TATTATCAAA GCCGCATTCC CATGAAAGAT
GCGGCCTTCA TGTCGCGTTG CGATGATCCC GATCTGCGCC GCGCCTGGCG CTCCCGCATC
GAAGATCACG ACGGCGACGT CGAAGAGGGC GGCGGCATCC GTCGCTGGCT GCGTCTTGCC
GAGGCGGTCG GGCTAGATCC GACTTACGTC GCATCGACCA AAGGCGTCCT GCCGTCGACC
CGGTTTGCCG TGGATGCCTA TGTGTCCTTC GTGCGTGAGA AGCCGCTTCT CGAGGCGGTT
GCATCCTCCC TGACGGAGCT TTTCGCGCCC AGGATCCACT CGGAGCGCAT TGCCGGTCTG
CTGGAGCATT ACGCCTTCGC CGACGAGTCG GCACTGGCCT ATTTCCGCCA GAGACTGGCT
GAGGCGCCCC GGGACGTCGA ATTCGGACTG GCTTTTGTCC TCGACCGTGC CGACACGCGC
GAAAAACAGG ATGCCGCCGC TGCGGCGCTT GCGTTCAAGA CGGATGTTCT TTGGTCCCAG
CTCGACGCGC TTTATTCGGC TTACGTCTCG CCGGGGCGCA TTCCACCGGG AGGCTGGGAT
GGCACGGAAG GGGTCGTGCG GGAGCCGAGA GCGCGGGAGG CAGCGGAATG A
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| Protein sequence | MTTADDRQAF HARLLEIGKQ RYHDKHPFHA MLHSGGCTTT QVRAWVINRY YYQSRIPMKD
AAFMSRCDDP DLRRAWRSRI EDHDGDVEEG GGIRRWLRLA EAVGLDPTYV ASTKGVLPST
RFAVDAYVSF VREKPLLEAV ASSLTELFAP RIHSERIAGL LEHYAFADES ALAYFRQRLA
EAPRDVEFGL AFVLDRADTR EKQDAAAAAL AFKTDVLWSQ LDALYSAYVS PGRIPPGGWD
GTEGVVREPR AREAAE
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