Gene Smed_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3909 
Symbol 
ID5318643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp361799 
End bp362458 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID640775719 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001312652 
Protein GI150376056 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG ACAGCACCAG AAACGCGCCC GTCGATATGA AGCTCGAAAT TGTCGTCGTG 
CCCGTGTCGG ATATCGACCG CGCAAAGGAA TTCTATACGA GCCTCGGCTG GCGGCTCGAC
GCCGACTTCG CCGGACCCGA TGACTACCGC GTGATCCAGT TCACTCCGCC TGGATCCGGA
GCCTCGGTCA TCTTCGGGAA GCATGTGACC GATGCGGAAC CGGGTTCCGC ACAGGGACTG
TACCTGATCG TTTCCGACAT CGAGGCCGCC CGCGAGGCGT TGCGGGGTCG CGGTGTCGAT
ATCAGCGAAG TGTTCCACGC CGGCGATGTG CATGCCGGCA AGGACGAGCC TTACCTGTTC
GGACGGCTCA GGGTTGGCGG CCCTGACCCA GAACGCCGCA GCTATCGTTC CTACGCTTCC
TTCCGCGATC CTGACGGTAA CGGCTGGCTG CTTCAGGAGG TCACCACGCG ACTACCAGGC
CGCGTCGACG CCAGTGCCAC GACGTTCAGC TCCGCCGCTG ATCTGGCAAG CGCATTCCGC
CGTGCGGAGG CGGCTCACGG CGAGTATGAA AAGCAACTCG GACACAGGGA CGAGGACTGG
CCCGTCTGGT ACGCAGATTA CATTGTCCGG GAGCAATCCG GGGAGCCCCG GCCATCCTGA
 
Protein sequence
MTADSTRNAP VDMKLEIVVV PVSDIDRAKE FYTSLGWRLD ADFAGPDDYR VIQFTPPGSG 
ASVIFGKHVT DAEPGSAQGL YLIVSDIEAA REALRGRGVD ISEVFHAGDV HAGKDEPYLF
GRLRVGGPDP ERRSYRSYAS FRDPDGNGWL LQEVTTRLPG RVDASATTFS SAADLASAFR
RAEAAHGEYE KQLGHRDEDW PVWYADYIVR EQSGEPRPS