| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3901 |
|---|
| Symbol | |
|---|
| ID | 5318214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 356194 |
|---|
| End bp | 356766 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640775711 |
|---|
| Product | putative nutrient deprivation-induced protein |
|---|
| Protein accession | YP_001312644 |
|---|
| Protein GI | 150376048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0076342 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG ACACAACAGG CCGCGGGTCG GGCGATCCAC TGGGCAGGCC TCTGACGGCC
GCGCAGGGCA TCGAGCGCGT AAGCGGCGTG CAGACCGGCG ATATCGGCCG GGATTCGGCA
GACCGCAATC TTCAAAATGC CGTCCGCGAA GATGTCAACG AGTTTAAGCA GTTCGCGGGC
GAACAGACTG AGCAGGCAAA GGCAGCCATC AGCCGCGCTG TTGAGGACGA AAAAAACGTC
GCTGCACGCC AGTTGGAAGG CGTTGCGGCA GCCCTCGAGA AGGTCGGAAG CGAACTCGAA
CAGTCGGATC AGCGGGCCAT CGGCCGCTAT GCCAAGCAGA TCGGCACGTC GCTCCACAGC
TTCGCGCGCA AGGCTGAGGG CCGCAACCTC GGCGAGATCG CCGGGATGGT CGAAGATTTC
GGCCGCAAGC AGCCGCTTGC CTTCCTCGGC ATGGCTGCAA TCGCAGGACT GGCCGCAAGT
CGGTTCCTCA CCGCGTCACC TCCGCGCCGG AACGGACAGG ATGCTTCGGG AGGAAACCGT
CAAACCAGCG AAAAGGAACC CTATAATGGC TAA
|
|---|
| Protein sequence | MTNDTTGRGS GDPLGRPLTA AQGIERVSGV QTGDIGRDSA DRNLQNAVRE DVNEFKQFAG
EQTEQAKAAI SRAVEDEKNV AARQLEGVAA ALEKVGSELE QSDQRAIGRY AKQIGTSLHS
FARKAEGRNL GEIAGMVEDF GRKQPLAFLG MAAIAGLAAS RFLTASPPRR NGQDASGGNR
QTSEKEPYNG
|
|---|
| |