| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3887 |
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| Symbol | |
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| ID | 5318681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 344603 |
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| End bp | 345709 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775699 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001312632 |
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| Protein GI | 150376036 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00157391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAG TACTTGTTAC CGGCGGCTGC GGTTTCATTG GCCGGCATGT GGTCGAAGAG
CTTCTCTCTG GGAACTACGA GTTGCGCATC CTCGATGCGC TGAACGAACA GGTCCATGCG
GACGCCCAGA TCACCCTGCC ACCGGAAGTA GATATGCGGC GCGCCGATAT ATGCGACGCT
GACGCGGTGA AGAGCGCACT GAAGGACGTC GATCACGTCA TTCATCTCGC TGCGGAGGTC
GGCGTCGGCC AATCCATGTA CGAGATCTCC CGCTATGTGG GCGTGAACGA CCTGGGCACC
GCCGTCCTGC TCGAGGCGAT GATCGGCATG CCGATCCGGC GGATCGTCGT CGCCTCTTCC
ATGAGCGTTT ACGGCGAGGG CTTGTACGAG ACTGCGGCCG GGGAACGCCG CGCGCATATC
CGGCGGTCTC CCGCCGAGAT CAAGACGGGT GCGTGGAACC CGTCCGGCCC CGATGGCGAG
AGCCTGAAGC CGATCGCGAC GGACGAGAAC AAGCCGGTCG ATCTTGCCTC CATCTACGCA
CTCACGAAAT ATGCGCAGGA GCGTCAGGTC CTTATATTCG GTGAAGCCTA TGGCATGGAC
GCGGTGGCGC TTCGGCTTTT CAACGTCTAC GGCGCCGGTC AGGCACTCTC CAATCCCTAT
ACCGGAGTGC TTGCCAACTT CGCCTCTCGA CTTGCCAACG GGCAGGCGCC GATGGTCTTT
GAGGACGGCC GTCAGAAGCG CGACTTCGTC CATGTTCGCG ACGTCGCGCG CGCTTTCCGG
CTTGCGCTCG AACAGCCGCA CGCCGCGGGC CACGTCATCA ATATCGGCAG CGGGCACGCT
TACGCGATCG CTGACATCGC CTCGCTGCTT GCCGATGCGA TGGGCGTGCC GGAGATCGGG
CCGGAGATCA TGCACAAGGC TCGTTCAGGA GATATCCGCA ATTGCTTCGC GGATATTTCC
AAGGCGCGCG ACCTCCTCGG CTTCGAGCCG GCGCACCGGC TTGAAGATTC GCTCGCGGAT
TTCGCCCAAT GGGTCCGCAG TGCCGGCGCG ATCGACCGCG GCGCCGAGAT GAAGCGCCAC
TTGGAAGCAC GGGGGCTGGT TCTATGA
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| Protein sequence | MTKVLVTGGC GFIGRHVVEE LLSGNYELRI LDALNEQVHA DAQITLPPEV DMRRADICDA
DAVKSALKDV DHVIHLAAEV GVGQSMYEIS RYVGVNDLGT AVLLEAMIGM PIRRIVVASS
MSVYGEGLYE TAAGERRAHI RRSPAEIKTG AWNPSGPDGE SLKPIATDEN KPVDLASIYA
LTKYAQERQV LIFGEAYGMD AVALRLFNVY GAGQALSNPY TGVLANFASR LANGQAPMVF
EDGRQKRDFV HVRDVARAFR LALEQPHAAG HVINIGSGHA YAIADIASLL ADAMGVPEIG
PEIMHKARSG DIRNCFADIS KARDLLGFEP AHRLEDSLAD FAQWVRSAGA IDRGAEMKRH
LEARGLVL
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