Gene Smed_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3876 
Symbol 
ID5318556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp333625 
End bp334074 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID640775688 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001312621 
Protein GI150376025 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.688354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA CCCTCGTCGT CCGCCGCGAG ACGCATGTCT CGGCGCCGCC CGCCGCGGTT 
TTCGCCCTGC TCACGGATCC GGAAAAGATC CTGCGATGGA TGGGAACGGA GGCCGAGGTC
GAGCCGAAGC CGGGCGGGCT CTATCTCGTC AATGTGACCG GAGCTCGATT CGCCCGAGGC
TCCTTTCGCG AGGTGGTCCC GGTACATCGC CTGGCTTACA GCTTCGGCTG GGACGGCAGC
GATGTCGTGC CGCCGGGTTC GAGCCTGGTG GAGATCGACC TGGTCGAAGA GGCGGACGGA
ACGCTGGTGC GCTTGACCCA TTCGGGTCTT CCCGATGCGG AGCAATGTGC CGGCCACGTG
GAAGGCTGGG CCCATTACCT CGATCGCTTG TCAGCGGCGG CGGCCGGACG TGATCCCGGG
CCCGATCCGT GGCACGGCCG TACAGGATAA
 
Protein sequence
MQETLVVRRE THVSAPPAAV FALLTDPEKI LRWMGTEAEV EPKPGGLYLV NVTGARFARG 
SFREVVPVHR LAYSFGWDGS DVVPPGSSLV EIDLVEEADG TLVRLTHSGL PDAEQCAGHV
EGWAHYLDRL SAAAAGRDPG PDPWHGRTG