Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3876 |
Symbol | |
ID | 5318556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 333625 |
End bp | 334074 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640775688 |
Product | activator of Hsp90 ATPase 1 family protein |
Protein accession | YP_001312621 |
Protein GI | 150376025 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.688354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA CCCTCGTCGT CCGCCGCGAG ACGCATGTCT CGGCGCCGCC CGCCGCGGTT TTCGCCCTGC TCACGGATCC GGAAAAGATC CTGCGATGGA TGGGAACGGA GGCCGAGGTC GAGCCGAAGC CGGGCGGGCT CTATCTCGTC AATGTGACCG GAGCTCGATT CGCCCGAGGC TCCTTTCGCG AGGTGGTCCC GGTACATCGC CTGGCTTACA GCTTCGGCTG GGACGGCAGC GATGTCGTGC CGCCGGGTTC GAGCCTGGTG GAGATCGACC TGGTCGAAGA GGCGGACGGA ACGCTGGTGC GCTTGACCCA TTCGGGTCTT CCCGATGCGG AGCAATGTGC CGGCCACGTG GAAGGCTGGG CCCATTACCT CGATCGCTTG TCAGCGGCGG CGGCCGGACG TGATCCCGGG CCCGATCCGT GGCACGGCCG TACAGGATAA
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Protein sequence | MQETLVVRRE THVSAPPAAV FALLTDPEKI LRWMGTEAEV EPKPGGLYLV NVTGARFARG SFREVVPVHR LAYSFGWDGS DVVPPGSSLV EIDLVEEADG TLVRLTHSGL PDAEQCAGHV EGWAHYLDRL SAAAAGRDPG PDPWHGRTG
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