Gene Smed_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3871 
Symbol 
ID5318870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp328762 
End bp329139 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID640775683 
Producthypothetical protein 
Protein accessionYP_001312616 
Protein GI150376020 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC TGGATCGGGC ACGCCGATGG GCAAGAGACA TCAAGCGGGA CGTTATCGTG 
CTGTGGCTGG CGGCGCGTGA CAGCCGTGTA CCATGGTATG CGAAACTGGC GGCTGGGGCG
ATTGCTGCCT ATGCACTGTC CCCGGTCGAT CTGATCCCGG ACTTCATCCC GATCCTCGGA
TATCTCGACG ATCTCGTCAT CGTCCCCTTG GGCATCATCG CGGTGCTCAG GCTCATCCCG
ACCGACGTTC TCGCGGAGCT GCGCATCGAA GCGCTGAAAC AGGTCGAGCG CCCGGTCAGC
AGAGCCGGGA TGGCTGCGGT GATATCGATC TGGCTTATCT TTGTAGCGCT GATCTCCTGG
ATGGCGCTTG CACCCTGA
 
Protein sequence
MNRLDRARRW ARDIKRDVIV LWLAARDSRV PWYAKLAAGA IAAYALSPVD LIPDFIPILG 
YLDDLVIVPL GIIAVLRLIP TDVLAELRIE ALKQVERPVS RAGMAAVISI WLIFVALISW
MALAP