| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3864 |
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| Symbol | |
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| ID | 5318301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 321397 |
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| End bp | 322638 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640775676 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001312609 |
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| Protein GI | 150376013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAC CGGACGTCAT TGTTATCGGT GCCGGGGTCG TAGGCCTTTC GGCTGCAATT
GCCGCCGTTG GCCGCGGCCT GTCCGTCACC GTGCTGGACC GCGAGGGTCC GGCGGCCGGG
GCCTCCGCGG GCAATGCCGG GGCCTTCGCC TTCACCGATA TATTGCCGCT CGCTTCGCCG
GGCATCCTGA GAAAAGCGCC GAAATGGCTC CTGGATCCGC TTGGGCCCCT GACAGTGCCG
CCCGCCTACG CGCTGAAGAT CGCGCCATGG ATGTTCCGCT TCTGGCGCGC GTGTCAGCCG
GGACGCGTGG CGCATTCGAC CGCGGCGCAG ACAGCGCTGA TGGACCTTTC GAAGGCGGAA
CTCGAACCCT TTCTCAAGGA AACCGGAACG GCGTCCATGC TGCGCAAGGA GGGCAACCTC
CAGGTCTATG AGGGCGAGGC GGAATTCAAG GCCTCGCTTG CCGGGTGGAA GGCGCGGGAG
GATCACGGTA TCGAGTTCCA TCATCTCGAC GCTGCTGCGA TGAGCGGGAT CCAGCCGGGC
CTTGCCGCCC GCTTCACCCA TGGCACCTTC ACACCCGGCT GGTACTCGAT CGCCGATCCG
AAGCTCTATA CGCTTGCGCT GGCCGATCAC TTCCGGACGA TCGGCGGGAA AGTCCAGCGA
GCGGAGGTTA CGGCCCTGAG GCCGGTAGAC GGCGGAGTGG ACGTCCTGAC CACCGACGGC
GAGATTCAGC GGGCGGCACA GGTGGTGCTA TCGGCCGGCG CTTTCTCGCA CCGGATCGCC
CGGACTATCG GCGAGAGCAT TCCGCTCGAA ACCGAACGCG GCTACAATAC GACGCTCCCC
GCCGGCGCTT TCGACCTGCG TACTCAGATC ACCTTCGGGG GCCATGGTTT CGTGGTGACC
CGGCTGTCGA CCGGCATTCG CGTCGGTGGC GCGGTCGAAC TCGGGGGGCT CGATCTACCG
CCGAACTTCC ACCGATCGGA AGCGATGCTG AAGAAAGCGC AGGGCTTCCT GCCGGGGCTG
AAGCCGGAAG GCGGGGTACA GTGGATGGGC TTCCGCCCCT CGCTGCCCGA CAGCCTGCCC
GCGATCGGCC GCGCCGTCGC TACGCCTCGG GTTGTCTACG CTTTCGGCCA CGGCCATCTC
GGATTGACCC AATCGGCGGG CACCGCAAGG ATCGTCGCCG ATCTCCTGAC CGGCCGGCAA
CCGGCCATCG ACATTGCATC CTTTTCGCCG CAACGCTTCT GA
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| Protein sequence | MAEPDVIVIG AGVVGLSAAI AAVGRGLSVT VLDREGPAAG ASAGNAGAFA FTDILPLASP
GILRKAPKWL LDPLGPLTVP PAYALKIAPW MFRFWRACQP GRVAHSTAAQ TALMDLSKAE
LEPFLKETGT ASMLRKEGNL QVYEGEAEFK ASLAGWKARE DHGIEFHHLD AAAMSGIQPG
LAARFTHGTF TPGWYSIADP KLYTLALADH FRTIGGKVQR AEVTALRPVD GGVDVLTTDG
EIQRAAQVVL SAGAFSHRIA RTIGESIPLE TERGYNTTLP AGAFDLRTQI TFGGHGFVVT
RLSTGIRVGG AVELGGLDLP PNFHRSEAML KKAQGFLPGL KPEGGVQWMG FRPSLPDSLP
AIGRAVATPR VVYAFGHGHL GLTQSAGTAR IVADLLTGRQ PAIDIASFSP QRF
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