| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3853 |
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| Symbol | |
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| ID | 5318728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 310982 |
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| End bp | 311560 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775665 |
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| Product | uncharacterized peroxidase-related enzyme |
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| Protein accession | YP_001312598 |
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| Protein GI | 150376002 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.26579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGAGG CCGTACACGA ATTCACCCTC GAACCGCTCG ACTGGCAACC CTATGTCAGG
CCCGTGAAGC TCGACGAGGC AACGACCGAA CAGCTCGAAG CCCTGAAGGT GACACCCTCC
AACACCAAGG TTTCGAATTA TGTCCTGGTG CTGGCCAATG AAGCGGAGAT GCTCGCCGAG
CGCACGCCGC TTTTCAACGA CATCATGTAC AGCGAAGGCG GCCTGTCGCG TGGGGGCCGC
GAAATTGGCG CCCTGGCGGC CTCCTTCGTC AACCGCTGCA TCTACTGCGC CTCGGTGCAT
GCCAACCGCT ATATCCAGCT CGAAAAGCGC CCGGAAGTGG TCGACGAGAT CTACAGGCGC
GGACTAGACG CGGATCTGCC GGATTTCGAG CAGGCACTGT TCAATTTCGG CGCCGACCTG
ACCGCGCATC CGGACAATGT CGGCGTCTAC CAGTTCTACC ATCTTCGCGA AATCGGCCTC
GACGATCTGG AGATCCTCGA CCTGATCCAT TCGATCGCGA TTTTCGGCTG GGCGAACCGC
CTGATGCATA CGCTGGGCGA ACCCCACCTG AAGGCGTGA
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| Protein sequence | MSEAVHEFTL EPLDWQPYVR PVKLDEATTE QLEALKVTPS NTKVSNYVLV LANEAEMLAE
RTPLFNDIMY SEGGLSRGGR EIGALAASFV NRCIYCASVH ANRYIQLEKR PEVVDEIYRR
GLDADLPDFE QALFNFGADL TAHPDNVGVY QFYHLREIGL DDLEILDLIH SIAIFGWANR
LMHTLGEPHL KA
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