Gene Smed_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3852 
Symbol 
ID5318727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp310477 
End bp310980 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640775664 
Producthypothetical protein 
Protein accessionYP_001312597 
Protein GI150376001 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.367857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTT CCACGAAAGT CGATGTGATC GACGCAGTTC TCGGCCTGGA TTCGTCCTCG 
CCCGTTCATG CGCTGCGCGA GCGGCGCGCC AAGCTCAAGC ATTTCACGCA GACAAGCTAT
GAAGCCGCCT TTACCCCCTC GGATCCGGGA AACTTTTCTT TTGCCATGCG GGCGGCCCTG
GCGGCGCGCA TGGCTGGCCT TTGGAGATCG GCTGAGCTCC AGGCGCACTA CAAGGAGCTG
CTGGAAGAGA GGGGATCGAC ACCCGGCCTC CAGGCGATTG CCGATCCGGG TGTAGTACCC
GAGGGCGACG AACGGCTCGC AACGATCCTT GCACATGTGG ACCTGGTGAC GCTCAAGCCC
AGGGAAGCGA CGCGCGCGAA CATCGAAGCG CTCTACGCCG TCGGGCTCGA CGACCGCGAT
ATCGTGACCC TCGCAGGTCT CATCGCCTTC GTGAACTATC AGGTGCTGGT CGTGGCCGGT
GTTAAAATGC TGAGGGACAA CTGA
 
Protein sequence
MTVSTKVDVI DAVLGLDSSS PVHALRERRA KLKHFTQTSY EAAFTPSDPG NFSFAMRAAL 
AARMAGLWRS AELQAHYKEL LEERGSTPGL QAIADPGVVP EGDERLATIL AHVDLVTLKP
REATRANIEA LYAVGLDDRD IVTLAGLIAF VNYQVLVVAG VKMLRDN