| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3850 |
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| Symbol | |
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| ID | 5318725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 307825 |
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| End bp | 308895 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775662 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001312595 |
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| Protein GI | 150375999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.60669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTG TGGTCCAATT CGAAAACGTC AACAAATATT ATGGCGCCCT GCCCGCGGTC
GATGGGCTGA ACCTCGCCAT AGAACCCGGC CAGTTCGTGA CGCTGCTCGG CCCTTCCGGG
TGCGGTAAGT CGACCACGCT CAGGATGCTC GGCGGTTTCG AGCAGCCCTC CTCAGGCGAG
ATCTATCTCG AGGGCAAGGC AATCTCGCAT CTGCCGCCGA ACAGGCGCAA CGTCAACATC
GTCTTCCAGG ACTATGCTCT CTTTCCGCAT CTCAATGTCG GCCGCAACAT CGCCTTCGGA
CTGGAACTGA AGGGACTGTC TTCCGACGCC ATCCACAAGC GGACGATGGA ACTGCTCGCC
CTCGTCAAGC TCGAGGATTT CGCCGGCCGC ATGCCCGACC AGCTTTCGGG CGGTCAAAGG
CAGCGTGTTG CTCTGATGCG CGCTCTTGCT CCCGACCCGA ACGTGCTTCT GCTAGACGAA
CCCCTGTCGG CGCTCGACGC CAAGCTGCGC CAGCAGATGC AGATCGAACT GAAGACCATT
CAGCGAACCA CCGGCAAGAC CTTCATCTTC GTGACTCATG ATCAGGAGGA AGCGCTGACC
ATGTCCGACG TCATCGTGGT GATGAATAAA GGCCGGATCG AGCAGATGGG GGACCCCAAC
GAGCTCTACT CGCGGCCACG CAGCCGCTTC GTCGCCAATT TCATCGGCCA GAGCAATTTC
CTCGAAGGCA AGGCACTCTC GGTAGATGGT ACGGTCGCAA CGATCGACTG GAACGGAACC
GCTATCCGCG CCGATGTCAA CGGAACGCAG CCTGCCAAGG ATAGCCCGAC GACCGTCGCG
CTGCGTCCAG AGGCACTCTA CTGCCTGGCG GAGCAGCCGC AGGACCGATT CGCCTTGAAA
GGCCGTATCG TCCAGCGCGT CTTCAAGGGC GCCCATACCG CGCTCACCGT CGATCTCGAA
AACGGAGCGC AGCTCCACCT GCAGCTCGAC CCCGTGGCGC TGTCGCACAT CGGGACGGAC
GAGATTTGGG TGGGCTGGCG CGAGCGTGAT GCGGTGGTTC TGGCCGACTG A
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| Protein sequence | MQPVVQFENV NKYYGALPAV DGLNLAIEPG QFVTLLGPSG CGKSTTLRML GGFEQPSSGE
IYLEGKAISH LPPNRRNVNI VFQDYALFPH LNVGRNIAFG LELKGLSSDA IHKRTMELLA
LVKLEDFAGR MPDQLSGGQR QRVALMRALA PDPNVLLLDE PLSALDAKLR QQMQIELKTI
QRTTGKTFIF VTHDQEEALT MSDVIVVMNK GRIEQMGDPN ELYSRPRSRF VANFIGQSNF
LEGKALSVDG TVATIDWNGT AIRADVNGTQ PAKDSPTTVA LRPEALYCLA EQPQDRFALK
GRIVQRVFKG AHTALTVDLE NGAQLHLQLD PVALSHIGTD EIWVGWRERD AVVLAD
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