| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3843 |
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| Symbol | |
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| ID | 5318571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 300408 |
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| End bp | 301808 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775655 |
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| Product | amidohydrolase |
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| Protein accession | YP_001312588 |
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| Protein GI | 150375992 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.865403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGATT TGCGCGACAG GTTTCTGGGC AACGGTGATT TCCTGCTTCA CCCCGGCAAG
GTCCTCTTGC CGGAAGGCCC TCGATCCGGA ATCGGGATAG TGGTCCGCAA GGGGCGCTTC
TCGGAAATCG GTGCCGCAGG ACTTGTCGGC AGCCGGAATC CCGACCTGAG GCCGATAGAG
TTGCCGCATC ATCTTGTGAT GCCAGGCTTC ATCGACACCC ATACCCATCT GACCCAGTCC
CTGGGGAAGT CGCTCGTCTT CGGCGAGCCG TCCGAGATCT TTCGCCGTAT CTGGGTGCCG
CTCGAAGGCA GTCTGGATGA ACGGATGGTC TATCTTTCGG CAAAGCTGGC GGCGCTTGAA
TGCCTGCGCG GCGGCTTTAC CGCCGCAGTC GATGCGGGCA CGCGTTCCGC GGGCCACATG
GACGCGCTGA TACGGGCGGC GCGTGAAACC GGCTTGCGTA GCGTCATAGG ACTTATCTGC
AACGATCTCG GCGGAGCCGC GGTGGTCCCC GACCGCACGA CGATCCTCAG GAATGCGGCC
GGACATCTGG CCGCATTCGA GGGCGATTCG CTCGTACATC CCTCACTCGC CATTTCCATT
CCCGAGGCGG CCAGCGACCA CATGCTGGCT GACGTCTCCA GCATGGCGCG GGAAGCGGGT
GTCATATTCC AGACCCATGT CAACGAACAC CTCGTCGCAG TCGAGCGCTC GCTGGTTGCA
AACGGCCGCC GTCCGCTGGA GCATCTCGCT CATCTCGGCG CACTCGGCCC GCATGTGCTG
ATCGCCCATT CCACGCTGGT GACACCGCAC GAACTGAACC TGTTGCGCCA CAGCGATACG
GCGGTCGCAT ACAATCCGGT GGCGAGCTTG TGGAAAGGCA ATGCCATCGC ACCCGCGCTG
CAAATGGCCG CACTCGGGAT CCGCTTCGGA CTGGGAACCG ACGGCACCCG CGCAGACGGT
TTCCGCCTCA TGGATGCCGC CGAGGGCCTG CAGCGCGCCG GCTTCGGGCT TGCGACGGGC
GACTCTTCCT GTGGAGGCGG CTGGCTCTGG ATCGACCGGG CAACAGCCCA GGCGGCGGAT
GCCGCAGGTC TTGGCTGCGT GACCGGCGCG ATCCGCGAGA AGCTTGCGGC CGATTTCCTC
CTGGTGGATC TCGACCGTCC CGAATTCACG CCCTCCCACG ATCTCATGTG GGAACTCGTG
CGCTACGGCA ACCGCGACCA GATCGACGCC GTCTTCACCG CCGGAATGCT TCGCCTCTGG
CAAGGCTGGC CGGTCCAATG GGATGCACGC GCGCTTCTTG CCGAGGTGCG CGAGGTCACG
GCCGATGCCA TAGCAAGGGC GCCGATCCAG CGCGTACACA AGCCATCGGC GGAGCACCGG
GCGCTGGGGC ATTTCGCATG A
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| Protein sequence | MTDLRDRFLG NGDFLLHPGK VLLPEGPRSG IGIVVRKGRF SEIGAAGLVG SRNPDLRPIE
LPHHLVMPGF IDTHTHLTQS LGKSLVFGEP SEIFRRIWVP LEGSLDERMV YLSAKLAALE
CLRGGFTAAV DAGTRSAGHM DALIRAARET GLRSVIGLIC NDLGGAAVVP DRTTILRNAA
GHLAAFEGDS LVHPSLAISI PEAASDHMLA DVSSMAREAG VIFQTHVNEH LVAVERSLVA
NGRRPLEHLA HLGALGPHVL IAHSTLVTPH ELNLLRHSDT AVAYNPVASL WKGNAIAPAL
QMAALGIRFG LGTDGTRADG FRLMDAAEGL QRAGFGLATG DSSCGGGWLW IDRATAQAAD
AAGLGCVTGA IREKLAADFL LVDLDRPEFT PSHDLMWELV RYGNRDQIDA VFTAGMLRLW
QGWPVQWDAR ALLAEVREVT ADAIARAPIQ RVHKPSAEHR ALGHFA
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