| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3820 |
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| Symbol | |
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| ID | 5318012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 273835 |
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| End bp | 275421 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775632 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312565 |
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| Protein GI | 150375969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATGC AGTCGACTAT CATTGCCGAG CAAAAGATGC CCTCTGTCGA GGCGCAGGGC
GGTGGGACGC CCTTCCTGGA AGTTCGCAAC CTCGAGAAGC GCTTCGGCGG CGTTCGCGCT
CTCAAGGGCG TGAGCTTCAC GATAGAACGC GGCCGTACCT ACCATCTCAT GGGCGAGAAT
GGATGCGGAA AGAGCACGCT CATCAAGATC ATCTCGGGCG CCCAGCCGGC CGATGGCGGT
GAGCTTGCGA TCAATGGCAA GAAAACCGAA GGCCTGACGC CGATCGGCGC CTTGGCGGCA
GGAATCGAGA CGGTTTATCA GGATTTGTCG CTTCTTCCCA ATCTGAGTGT AGAGGAAAAC
GTCGCGCTGA CTCAGCAGCT GGTCGCCTCC AACGGCAGGC TTGCGCGTCG TCTCGATCTC
AAGGTTCTGC GGGAAACGTC GATCCGTGCG CTGAAGGAGG TCGGCCTGCC GACGGAGCCC
GCCTTTCTTT CGACGCCGGT CGAAGAACTA CCCATCGCGA CGCGTCAGCT CATTGCCATT
GCTCGCGCTA TCGCTTCCGA TGCCGGTCTG GTCATTATGG ATGAGCCGAC GACCGCATTG
ACGCGGCGCG AAGTTGATAA CCTCATTCGC GTCGTTCACG GCCTGCATGC CAAAGGCGTG
TCGGTCCTTT TCGTGACGCA CAAGCTCGAC GAGTGCAAGG CCATCGGTGG GCAGGCAATC
ATCATGCGCG ACGGCCTCAA GGTCGCCGAA TGCGACGTTT CCACCCAATC GAAGAGCGAA
CTTGGCTTCT GGATGACGGG CAAGAAGTTG GACGAGACGC GTTATCGCGT CGACGCGCAC
GGGGACGAGA CGCTGCTTTC GGTCGAGCAA CTCGGGGGGA GCGGCTTCGA CAATGTCAGC
TTCGCGGTTG CCAAGGGCGA GATATTCGGG ATCACGGGAC TGCTGGATTC CGGGCGGAAC
GAGCTTGCGC TTTCGCTGGC CGGCGTAGAA CCGGCGCGGC GCGGCTCCGT CCTGATGGGC
GGCAAAGCGG CAGACCTGTC TTCTCCGGCC TCGGCAATTG CGGCCGGCAT CGGCTATGTC
CCGGAGGATC GCCTGTCGGA AGGGCTTTTT CTTGGAAAAT CCATCCGCGA AAACATCGTC
ATGGCGGTCC TCGACCGGCT CCGGGGCGCA TTCGGTCTGC TGGACAGCCG CCGGGCGAGG
GCACTGGCGC AGAAGACCGT CGACGATCTG CAGGTCGCGA CGCCGGATAT CGACAATCCC
GTCACGTCTC TCTCGGGGGG CAACCAGCAG AGGGTTCTGA TCGGCCGCTG GCTGACCATC
GAGCCGAGCC TGCTCATCCT GCACGGCCCG ACCGTCGGTG TCGATGTCGG GTCGAAGGAC
ACGATTTTTC GCATCATCCA GCGTCTTGCC GGAGATGGGA TGAGCGTCAT TATCATCAGC
GACGACCTGC CCGAGCTCCT ACAGAACTGC GATCGCGTCA TGGTCATGCG CAAGGGCCGG
GTCGCCGATG TCTTCACGGC TGAAGGGCTT GAGGAAGACG TAATCTACAA ATCGATGATG
GCCGAAGCCG GCCAAGGAGT TCAATAA
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| Protein sequence | MPMQSTIIAE QKMPSVEAQG GGTPFLEVRN LEKRFGGVRA LKGVSFTIER GRTYHLMGEN
GCGKSTLIKI ISGAQPADGG ELAINGKKTE GLTPIGALAA GIETVYQDLS LLPNLSVEEN
VALTQQLVAS NGRLARRLDL KVLRETSIRA LKEVGLPTEP AFLSTPVEEL PIATRQLIAI
ARAIASDAGL VIMDEPTTAL TRREVDNLIR VVHGLHAKGV SVLFVTHKLD ECKAIGGQAI
IMRDGLKVAE CDVSTQSKSE LGFWMTGKKL DETRYRVDAH GDETLLSVEQ LGGSGFDNVS
FAVAKGEIFG ITGLLDSGRN ELALSLAGVE PARRGSVLMG GKAADLSSPA SAIAAGIGYV
PEDRLSEGLF LGKSIRENIV MAVLDRLRGA FGLLDSRRAR ALAQKTVDDL QVATPDIDNP
VTSLSGGNQQ RVLIGRWLTI EPSLLILHGP TVGVDVGSKD TIFRIIQRLA GDGMSVIIIS
DDLPELLQNC DRVMVMRKGR VADVFTAEGL EEDVIYKSMM AEAGQGVQ
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