Gene Smed_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3793 
Symbol 
ID5317994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp242993 
End bp243394 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID640775606 
Productresponse regulator receiver protein 
Protein accessionYP_001312539 
Protein GI150375943 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA GCCAGCGCAT TATTGCGATT GTGGATGATG ACGAACTGGT TCGTCGCGCG 
CTTTGCCGTC TCGTTCAGTC ATTGTCGTTG AAACCAGTCG CGTATGCCTC CGGCGAATTG
TTTCTGAAGG AGCTTGAACA GACCAGCCCG TCCTGCGTGC TCCTGGACTT TCACATGCCG
AACATGAATG GGCTCGACGT ATTGCACGAG CTCAGCGCAC GACGGGCGAG GTTGGCCGTC
ATCGTCATAA CCGGCGCGGA TGAAGAGGGA GTGCGCGAAA GCTGCATGCG AGCCGGCGCC
TCGGGCTTCC TCAACAAGCC GCTTTCCCGC GACACGCTTT CATCGGCTAT CGAGGCCCTG
CGAGGTGATC AGCGCCCCGC AAAGGCGCCA CGCTCCCAAT GA
 
Protein sequence
MSESQRIIAI VDDDELVRRA LCRLVQSLSL KPVAYASGEL FLKELEQTSP SCVLLDFHMP 
NMNGLDVLHE LSARRARLAV IVITGADEEG VRESCMRAGA SGFLNKPLSR DTLSSAIEAL
RGDQRPAKAP RSQ