Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3788 |
Symbol | |
ID | 5317956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 236230 |
End bp | 237210 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775601 |
Product | hypothetical protein |
Protein accession | YP_001312534 |
Protein GI | 150375938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.111578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA TCATTCGTGA AGAGATCGCA CTCTCCTTCT TCGGGATGCT CCTTCTTGGC AGTGCCGCCT TGGCACCTGC TGTGCTGGTA CCTGCCGCCC TGGCGCAGGA AGCAGGCGAC TATGCGCCGC TTGCCGAATA CGCCGCGGCA GAGGATCCGC CTGTCTTCGA TACGCCTGAG AAGGCGGTGG AGGCGTTCAA AGAGACCGTC AATGGCGGCG ATTTTGACAA ATTGGCGGTG CTTTTGGGTC TGGACCCGGC CAAGACAAAG TCGAGCGAGG GCGTAATGGA GACCTATGCC GACATACAGG AAGGCGTAAA CGAAAAGGTC GCCGTCGAAG ATGTGGAAGG CCGCAAGGTG ATCGAGATCG GCGACGAGCG GTGGCCGTTT CCCTTCCCGG TCTCGAAAGG GGAGGACGGC AAGTGGGCGT TCGACACCTA TGTCGGCCTA GAAGAGATCG CCAACCGCCG GGTCGGCGAT AATGAGCTTG CCACGATTGC CACGATGCGC GCCTATGTTG GCGCGCAGGA AGAATATGCG CGCGGCGACC ATGACGGCGA TGGAGTTCTG GAATACGCCC AAAAGCTGAT CAGCGAAAAG GGCGCGCAGG ATGGCCTCTA CTGGCCCGCT GAGGAGTTCG GCGGAGAGGA GAGCCCCGCT GCTGCGGCGC TTGCAGAGGG TGATGCCTTA GAACGGGCGA AGGCCGGCGA AGGCTTCCAG GGTTACCGCT ACCGTATTCT AACAGGCCAG GGCGACAATA TTGCGGGCGG AAAATTCGAC TATATCATCA ACGGCAACAT GATCGCCGGT TTCGGTCTGG TTGCTTGGCC GGTGAGATAC GGCGTCACGG GAGTGAAGAC CTTCGTGGTC AATCGCAACG GAATTGTATA CGAGGCGGAT CTCGGCGGGG ATACCGAAAA GACTGCCGTC GACATCCGCA CGTTCAACCC CGGCGACCAG TGGATGGTCG TCCCGGACTG A
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Protein sequence | MTKIIREEIA LSFFGMLLLG SAALAPAVLV PAALAQEAGD YAPLAEYAAA EDPPVFDTPE KAVEAFKETV NGGDFDKLAV LLGLDPAKTK SSEGVMETYA DIQEGVNEKV AVEDVEGRKV IEIGDERWPF PFPVSKGEDG KWAFDTYVGL EEIANRRVGD NELATIATMR AYVGAQEEYA RGDHDGDGVL EYAQKLISEK GAQDGLYWPA EEFGGEESPA AAALAEGDAL ERAKAGEGFQ GYRYRILTGQ GDNIAGGKFD YIINGNMIAG FGLVAWPVRY GVTGVKTFVV NRNGIVYEAD LGGDTEKTAV DIRTFNPGDQ WMVVPD
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