Gene Smed_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3788 
Symbol 
ID5317956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp236230 
End bp237210 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID640775601 
Producthypothetical protein 
Protein accessionYP_001312534 
Protein GI150375938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA TCATTCGTGA AGAGATCGCA CTCTCCTTCT TCGGGATGCT CCTTCTTGGC 
AGTGCCGCCT TGGCACCTGC TGTGCTGGTA CCTGCCGCCC TGGCGCAGGA AGCAGGCGAC
TATGCGCCGC TTGCCGAATA CGCCGCGGCA GAGGATCCGC CTGTCTTCGA TACGCCTGAG
AAGGCGGTGG AGGCGTTCAA AGAGACCGTC AATGGCGGCG ATTTTGACAA ATTGGCGGTG
CTTTTGGGTC TGGACCCGGC CAAGACAAAG TCGAGCGAGG GCGTAATGGA GACCTATGCC
GACATACAGG AAGGCGTAAA CGAAAAGGTC GCCGTCGAAG ATGTGGAAGG CCGCAAGGTG
ATCGAGATCG GCGACGAGCG GTGGCCGTTT CCCTTCCCGG TCTCGAAAGG GGAGGACGGC
AAGTGGGCGT TCGACACCTA TGTCGGCCTA GAAGAGATCG CCAACCGCCG GGTCGGCGAT
AATGAGCTTG CCACGATTGC CACGATGCGC GCCTATGTTG GCGCGCAGGA AGAATATGCG
CGCGGCGACC ATGACGGCGA TGGAGTTCTG GAATACGCCC AAAAGCTGAT CAGCGAAAAG
GGCGCGCAGG ATGGCCTCTA CTGGCCCGCT GAGGAGTTCG GCGGAGAGGA GAGCCCCGCT
GCTGCGGCGC TTGCAGAGGG TGATGCCTTA GAACGGGCGA AGGCCGGCGA AGGCTTCCAG
GGTTACCGCT ACCGTATTCT AACAGGCCAG GGCGACAATA TTGCGGGCGG AAAATTCGAC
TATATCATCA ACGGCAACAT GATCGCCGGT TTCGGTCTGG TTGCTTGGCC GGTGAGATAC
GGCGTCACGG GAGTGAAGAC CTTCGTGGTC AATCGCAACG GAATTGTATA CGAGGCGGAT
CTCGGCGGGG ATACCGAAAA GACTGCCGTC GACATCCGCA CGTTCAACCC CGGCGACCAG
TGGATGGTCG TCCCGGACTG A
 
Protein sequence
MTKIIREEIA LSFFGMLLLG SAALAPAVLV PAALAQEAGD YAPLAEYAAA EDPPVFDTPE 
KAVEAFKETV NGGDFDKLAV LLGLDPAKTK SSEGVMETYA DIQEGVNEKV AVEDVEGRKV
IEIGDERWPF PFPVSKGEDG KWAFDTYVGL EEIANRRVGD NELATIATMR AYVGAQEEYA
RGDHDGDGVL EYAQKLISEK GAQDGLYWPA EEFGGEESPA AAALAEGDAL ERAKAGEGFQ
GYRYRILTGQ GDNIAGGKFD YIINGNMIAG FGLVAWPVRY GVTGVKTFVV NRNGIVYEAD
LGGDTEKTAV DIRTFNPGDQ WMVVPD