Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3760 |
Symbol | |
ID | 5319052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 203807 |
End bp | 204595 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775573 |
Product | hypothetical protein |
Protein accession | YP_001312506 |
Protein GI | 150375910 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.019501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATCG ATGACGCTTT CAAGGCGCTG ATGCGGCTGG ACGACGGTGT GCTGATGCGC GGCGCCTTTT TCGTGATGCT CTCGGCTGCC GGGATCTTCC TGCTGATCGA CATGCGCGAG ATCGCGGCCA TGAATGCAGG GTTGCCGGGT TTTGATCCGA TGCTGGAGGA TAGTCCGGTT CTGCCTCCGG CGGTGACGGA GGCTGCGCCC AAGGGGTCGC CGGTTCATCC CGCAAGCTCC GATGAAGTCC TGCGTCAGCC GATGAGGTTC GAACTAGGGT CCGGCGGTGT CCTGCTCGCC GAGGGTACGA TCGATCTCGG AGCCGCTGCG CGCTTCGCGC AAGAGATCGA AGCGCGCGGG GAGTATGTGA AGACCGTGGC TCTCAACTCG CCGGGCGGAT CTGTCGAGGA TGCGCTCGCT ATATCCAAAC TGATCCGTGA AAAGAAGCTC GATACAAAAA TAGCCTCGAG GGCACTCTGT GCCTCGTCTT GTCCGATCGT TTTCGCCGGG GGTGTGGCGC GCGTCGCGGC TAGCGATGCG CTGATCGGCG TGCATCAGGT CTTCAGCGGC GGCGGCGACG ACCGGTCGAC GCCGGCGCAA GCCATGTCGT TTGCACAATC CACCACCGCC CGGGTTGCAC GCCATCTAGA CACGATGGGC ATCGGCGCCG GGCTCTGGAT CAATGCTCTC GAAACGCCAC CCGAGCGGCT CTACTATCTG ACCACCAAGG AGATGGCCGA GTTCCATCTG ATCACCGAGC CGGTTGAGAC AGCCAAGAAG AAAGAATGA
|
Protein sequence | MRIDDAFKAL MRLDDGVLMR GAFFVMLSAA GIFLLIDMRE IAAMNAGLPG FDPMLEDSPV LPPAVTEAAP KGSPVHPASS DEVLRQPMRF ELGSGGVLLA EGTIDLGAAA RFAQEIEARG EYVKTVALNS PGGSVEDALA ISKLIREKKL DTKIASRALC ASSCPIVFAG GVARVAASDA LIGVHQVFSG GGDDRSTPAQ AMSFAQSTTA RVARHLDTMG IGAGLWINAL ETPPERLYYL TTKEMAEFHL ITEPVETAKK KE
|
| |