Gene Smed_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3760 
Symbol 
ID5319052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp203807 
End bp204595 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640775573 
Producthypothetical protein 
Protein accessionYP_001312506 
Protein GI150375910 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.019501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG ATGACGCTTT CAAGGCGCTG ATGCGGCTGG ACGACGGTGT GCTGATGCGC 
GGCGCCTTTT TCGTGATGCT CTCGGCTGCC GGGATCTTCC TGCTGATCGA CATGCGCGAG
ATCGCGGCCA TGAATGCAGG GTTGCCGGGT TTTGATCCGA TGCTGGAGGA TAGTCCGGTT
CTGCCTCCGG CGGTGACGGA GGCTGCGCCC AAGGGGTCGC CGGTTCATCC CGCAAGCTCC
GATGAAGTCC TGCGTCAGCC GATGAGGTTC GAACTAGGGT CCGGCGGTGT CCTGCTCGCC
GAGGGTACGA TCGATCTCGG AGCCGCTGCG CGCTTCGCGC AAGAGATCGA AGCGCGCGGG
GAGTATGTGA AGACCGTGGC TCTCAACTCG CCGGGCGGAT CTGTCGAGGA TGCGCTCGCT
ATATCCAAAC TGATCCGTGA AAAGAAGCTC GATACAAAAA TAGCCTCGAG GGCACTCTGT
GCCTCGTCTT GTCCGATCGT TTTCGCCGGG GGTGTGGCGC GCGTCGCGGC TAGCGATGCG
CTGATCGGCG TGCATCAGGT CTTCAGCGGC GGCGGCGACG ACCGGTCGAC GCCGGCGCAA
GCCATGTCGT TTGCACAATC CACCACCGCC CGGGTTGCAC GCCATCTAGA CACGATGGGC
ATCGGCGCCG GGCTCTGGAT CAATGCTCTC GAAACGCCAC CCGAGCGGCT CTACTATCTG
ACCACCAAGG AGATGGCCGA GTTCCATCTG ATCACCGAGC CGGTTGAGAC AGCCAAGAAG
AAAGAATGA
 
Protein sequence
MRIDDAFKAL MRLDDGVLMR GAFFVMLSAA GIFLLIDMRE IAAMNAGLPG FDPMLEDSPV 
LPPAVTEAAP KGSPVHPASS DEVLRQPMRF ELGSGGVLLA EGTIDLGAAA RFAQEIEARG
EYVKTVALNS PGGSVEDALA ISKLIREKKL DTKIASRALC ASSCPIVFAG GVARVAASDA
LIGVHQVFSG GGDDRSTPAQ AMSFAQSTTA RVARHLDTMG IGAGLWINAL ETPPERLYYL
TTKEMAEFHL ITEPVETAKK KE