| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3747 |
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| Symbol | |
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| ID | 5318737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 190227 |
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| End bp | 190907 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775560 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312493 |
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| Protein GI | 150375897 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.302501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCAC TCATCGAGGC ACATGGCCTC ACGCGTATCC TGCAAGAGAC GGTTCCGGTA
ACGCTGGTGA AGGACATCGA CCTCACGATA GGAGAGGGCG AGTTCGTAGC CGTTACCGGC
CTCTCCGGAT CGGGAAAGTC GTCGCTCCTC TACCTGCTGG GGCTACTCGA CCGCCCGACG
CGAGGCATGC TCCGCGTCCG CGGCCGGGAC ACCGAGCCTA TGAGCGAGAC GAGCCGGGCG
GAAACCCGCC TTTCCACGAT GGGGTTCGTT TTCCAGTTCC ATTTCCTGCT GCCGGAGTTC
ACCGCCCGCG AAAACGTCGA GATCCCTATG CGTAAGGTCG CCCGTCTCGG CCGCGACGAA
ATGCGGGCGC GGGCGACGGA GCTTCTGTCC TCGCTCGGCC TCGTCGATCA TCTCGACAAG
CGGCCGGATC AGCTCTCGGG CGGCCAGCGC CAGCGTGTGG CGGTCGCGCG GGCGCTTGCC
AACGATCCGC CGCTGATCCT GGCCGACGAA CCGACCGGAA GCCTCGACAG CACGAGTTCG
GAGCAGGTGT TTGCAATCCT CGACGGTCTG GTCCGCGAAC GCGGCAAGAC GGTCGTCGCC
GTGACGCATG ATTTCGGCAT GGCCGCGCGC ATGGACCGCA GAATCCACCT TGTGGACGGC
GAGGTCAGCA AGGAAGAATA G
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| Protein sequence | MSPLIEAHGL TRILQETVPV TLVKDIDLTI GEGEFVAVTG LSGSGKSSLL YLLGLLDRPT
RGMLRVRGRD TEPMSETSRA ETRLSTMGFV FQFHFLLPEF TARENVEIPM RKVARLGRDE
MRARATELLS SLGLVDHLDK RPDQLSGGQR QRVAVARALA NDPPLILADE PTGSLDSTSS
EQVFAILDGL VRERGKTVVA VTHDFGMAAR MDRRIHLVDG EVSKEE
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