Gene Smed_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3741 
Symbol 
ID5318731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp185404 
End bp185784 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content61% 
IMG OID640775554 
Productendoribonuclease L-PSP 
Protein accessionYP_001312487 
Protein GI150375891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA AGGTCGAAAC CGGGATTACC GCATCCCGCG CCCCCTTGAG CGGCACAGTG 
AAGGCGGGCC AGATCGTGAG ATCGGTTCAC ATAGCAAAGA ACCCGGAGAC CGGCGAACTC
GTCACCGGGG ACATCGAATG TCAGGCGCGG CAGGTCTTCT CCAACCTCCG ACAGGCGCTG
GAAGCGGCCG GAAGCACGCT TGCCGCTGTC GCGCAGATAC AGGCCTATCT GATCGATAGG
GCCGACGCCG CCGGCATGAA CAAGGTATAC CGTGAATTCT TCACGCCTCC ATATCCCGTC
CGGGCAACTG TCGTCACGGA GCTCCTTTCC CCCGGTATAC GCCTTGAAAT CCTGGCCACG
GCGGTTTGCT CCAGGGATTG A
 
Protein sequence
MFEKVETGIT ASRAPLSGTV KAGQIVRSVH IAKNPETGEL VTGDIECQAR QVFSNLRQAL 
EAAGSTLAAV AQIQAYLIDR ADAAGMNKVY REFFTPPYPV RATVVTELLS PGIRLEILAT
AVCSRD