Gene Smed_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3740 
Symbol 
ID5318668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp184977 
End bp185360 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content62% 
IMG OID640775553 
Productendoribonuclease L-PSP 
Protein accessionYP_001312486 
Protein GI150375890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAG TCATTGATAC CGGCGCCGAT CCATCGGACG TTCCCGTCAG TGAAGCGGTT 
CGGGCCGGCG GTCTCTTCTG GTCAGTGCAC GTCTCGGAGG ATCCGGTCAC CGGCGAGCCG
GTCTTCGGCG ACATCGAAAC GCAGGCACGC AGAACGCTGC AAAACCTGGA AATAGCGATC
AGGGCCGCCG GCGGCTCCCT CGCAAATGTC GTGCAGATGC AGGTGTTCCT CACTGAAAGA
GCCGACGCTC CCGGCATGAA CAGGACCTAT ACGGAGTTCT TCAGGGAGCC CTATCCGGTG
CGCGCGACCG TGGTCGTGAA GGAGCTCATC ACCCCGGGCT TGCGCATCGA GGTGCTTGCC
CATGCGGTGC TCGACAGTGC CTGA
 
Protein sequence
MFEVIDTGAD PSDVPVSEAV RAGGLFWSVH VSEDPVTGEP VFGDIETQAR RTLQNLEIAI 
RAAGGSLANV VQMQVFLTER ADAPGMNRTY TEFFREPYPV RATVVVKELI TPGLRIEVLA
HAVLDSA