Gene Smed_3739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3739 
Symbol 
ID5318667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp183480 
End bp184943 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content64% 
IMG OID640775552 
Productaldehyde dehydrogenase 
Protein accessionYP_001312485 
Protein GI150375889 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGG AAAGCACCGC ACCCGCCTAT GGGCGTCTCG GCATGCTGAT CGATGGCCGC 
TGGGTCTATG AGGCGGAGGG GAGCAGCGAC GTGGTGAATC CCGCAACGGG TCAGACGATC
GCACGGCTGC CGCACGCATC CGATAGCGAG ATCGCCGAAG CCGTCGCGTC CTCGCAGCGC
GCCTTCGAGA GCTGGAAGGA TCGCTCTCCG CTCGAGCGCA GCCACATCTT GCGCCGCTTC
GCAGACCTCG CCCGCAAGCA CGCCGAGGAG ATCGCCGCCA ATATGACCCT CGATCAGGGC
AAACCGCTCG GCGAGGCGAT CGGCGAGGTC CGATTTGCCG CCGATCATGC CGACTGGCAC
GCCGAGGAGG CCCGCCGCAC CTACGGGCGG ATCATTCCAT CGCGCGACCC ACGCGTGCAG
CAGATGGTCG TTCGCGAACC GGTGGGCGTC TGCGTCGCCT TCACCCCTTG GAATTTCCCC
TTCAGCCAAG CGTTGCGCAA GGTGGTGGCG GCGCTCGCGA GCGGCTGCAC CATCATCCTC
AAGGGACCTG GGGAATCTCC CTCTTCCACT GTGGCAATCG GGCGGCTGAT GCAGGAGGCC
GGTCTGCCGG ACGGCTGTCT CAACATCGTC TGGGGCGACC CGGCTCACCT TTCGGAGTCA
TTGCTGGGGG CGCCGGAAGT CCGGAAGCTC TCCTTCACCG GCTCGGTCGG GGTCGGGAAG
CATCTCGCGA GCCTTGCAGG CAAGTACATG AAACGGTCGA CGATGGAGCT TGGGGGTCAT
GCACCGGTGA TCGTCTTTGA CGACGCCGAC ATCGAGGCGG CAGCCGACGC GCTTGCGGGC
CAGAAGGTGC GCAATGCCGG CCAGGTCTGC ATCTCGCCAA CACGCTTCTA CGTGCAGGCG
AAAGAGCATG ACCGTTTCCT GGCTCGCTTT ACCGAGAGAA TCGCTTCGAC AAAGGTCGGA
GACGGTTTCC AGGAGGGGGT GCAGATGGGT CCGCTCTGCC ACAGTCGCCG CCTGGCTGCC
ATGGAGGATT TCGTTCAGGA CGCTCGCGAG CAAGGTGCTA CAATCGTTAC CGGCGGCGAG
CGCATTGGGA ATGCCGGATT TTTCTATGCG CCCACCGTGG TCGCCGGCGG CACCGATGAA
CTGCGCCTGA TGAAGGCGGA ACCCTTCGGA CCGATTGCCG TCGTCACGCC CTTCGGCAAT
TTCGACGAGG TGATCCGGCG CGCCAACAGC CTGCCCTTCG GTCTTGCTTC CTATGTGTTC
ACCGCTTCGA GCAACCGAGC GCAGCACGCT GCCCAAGCTC TTGCCGCCGG GATGGTAAGC
ATCAATCATT TCGGCCTTGC CCTGCCGGAA ACCCCCTTCG GCGGGATCAA CGACAGCGGC
TATGGCAGCG AGGGGGGGTC GGAGACACTC GACGGCTATC TGAACACCAA GTTCGTCACC
CGATTCGACC AGATCCCGCA GTGA
 
Protein sequence
MNPESTAPAY GRLGMLIDGR WVYEAEGSSD VVNPATGQTI ARLPHASDSE IAEAVASSQR 
AFESWKDRSP LERSHILRRF ADLARKHAEE IAANMTLDQG KPLGEAIGEV RFAADHADWH
AEEARRTYGR IIPSRDPRVQ QMVVREPVGV CVAFTPWNFP FSQALRKVVA ALASGCTIIL
KGPGESPSST VAIGRLMQEA GLPDGCLNIV WGDPAHLSES LLGAPEVRKL SFTGSVGVGK
HLASLAGKYM KRSTMELGGH APVIVFDDAD IEAAADALAG QKVRNAGQVC ISPTRFYVQA
KEHDRFLARF TERIASTKVG DGFQEGVQMG PLCHSRRLAA MEDFVQDARE QGATIVTGGE
RIGNAGFFYA PTVVAGGTDE LRLMKAEPFG PIAVVTPFGN FDEVIRRANS LPFGLASYVF
TASSNRAQHA AQALAAGMVS INHFGLALPE TPFGGINDSG YGSEGGSETL DGYLNTKFVT
RFDQIPQ