| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3722 |
|---|
| Symbol | |
|---|
| ID | 5318588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 164489 |
|---|
| End bp | 165064 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001312468 |
|---|
| Protein GI | 150375872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAG ATCTTTTCGG GTACACCCCC ACAATGCTGG AAGGCTTTCG TTACCAAGCG
GAGGTCGTTC CGCAGAAGCT TCAGGAAGCG CTCCTGGGGG TATTGCCAGG ACTTTCCTTC
AGGCCTTTCG ACTTTCACGG CTACGAGGGT AAGCGACGGG TGGTCTCGTT TGGCTGGAAG
TACGACTTCG ATACCGAATC GGTCCGCAAG ATCGACGACA TTCCCTCTTT TCTTTTGCCG
CTACGGCAAT TGGCGGCCGA TTTCGCCGGG CTGCCGGCGG AGAAACTCGA GCAGGCTCTG
ATTACCGAAT ACGACGTAGG AGCACCGATC GGGTGGCACA GGGACAAGGC GGTGTTCGGC
AGGGTCGTCG GTGTTTCGCT CCTCGCTCCC TGCACCTTCA GGCTTCGCCG AAGGCGCGCC
GGCAAATGGG AGCGGGCATC GGTCGCTCTG GAGCCCGGCT CCGCATATCT CCTCTCCGGT
GCCGCGCGGT CCGAGTGGGA GCATTCCATT CCGCCGCTGG ACGGCCTGCG CTATTCGGTC
ACGTTCCGCG AGCTGCATGC CGGAACGACG GGTTGA
|
|---|
| Protein sequence | MQEDLFGYTP TMLEGFRYQA EVVPQKLQEA LLGVLPGLSF RPFDFHGYEG KRRVVSFGWK
YDFDTESVRK IDDIPSFLLP LRQLAADFAG LPAEKLEQAL ITEYDVGAPI GWHRDKAVFG
RVVGVSLLAP CTFRLRRRRA GKWERASVAL EPGSAYLLSG AARSEWEHSI PPLDGLRYSV
TFRELHAGTT G
|
|---|
| |