| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3702 |
|---|
| Symbol | |
|---|
| ID | 5318311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 143174 |
|---|
| End bp | 143827 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775515 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001312448 |
|---|
| Protein GI | 150375852 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG ATGCGATCGA CCTGCGCATT CTCGAGGCGA TCCAGGCCGA TGGGCGTATC
ACCAAATTGG CACTTGCCGA GAAGGCGGGC CTGTCGCCGA CGCCCTGCTG GATGCGGCTC
AGAAAGCTTG AGAAAGCCGG CATCGTCACC GGCTATCACG CCCGCGTGGC ACTGAGGCGG
GTGGCACCTG TCGCCAGCGT CATGATGGAG ATCACGCTCG GCAACCACCG GCAGGCCGAT
TTCGATCGTT TCGAGCGGGC CATTGCCGCG ATCCCCGAGA TCGTCGCCTG CTGGTCCGTC
GGCGGCGGGG TCGACTATAT CCTCAAGATC ATGACGGCGG ACATCGACGC CTACCAGCGC
TTGGTCGACG GGCTTCTCGA AAGAACTCGG CATCGATCGA TATTTCACCT ACATCGTCAC
GAAGACGGTC AAGGACGAGA CCGTCCTGCC GCTCGGCTCG CTGTTGCCGC AAGCGTCGGC
TGGGCAGGAT TAGGCGACAC CGGGCGCAGC CCAGGCAACG GCGCTCGAGA TAGTCAATCT
CTCCCCCCAT TGCCCCCACT TTGGTCAAAG TCTCTCCCCT GCCCTGTCCG TTTGGACAAT
CTCTCTCCAC AACGGTGGCA CTCTTCTCTC AACAGTCGAG GAGAACCCTT ATGA
|
|---|
| Protein sequence | MKLDAIDLRI LEAIQADGRI TKLALAEKAG LSPTPCWMRL RKLEKAGIVT GYHARVALRR
VAPVASVMME ITLGNHRQAD FDRFERAIAA IPEIVACWSV GGGVDYILKI MTADIDAYQR
LVDGLLERTR HRSIFHLHRH EDGQGRDRPA ARLAVAASVG WAGLGDTGRS PGNGARDSQS
LPPLPPLWSK SLPCPVRLDN LSPQRWHSSL NSRGEPL
|
|---|
| |