| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3665 |
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| Symbol | |
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| ID | 5318062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 104426 |
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| End bp | 105604 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775478 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_001312411 |
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| Protein GI | 150375815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00161837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGA CAACGCACTC CATGCAGACA CCGATCAATA TAGACCCGGA CTACCTCACC
AGCCGGCTGA AAGCCCTGCT CGAAATTGCG AGCCCGACCG GTTTCACCGA TGAGGCGGTG
CGCTACACCG CGCGTGAGCT CGAGCGTCTC GGGCTGGAAG TGAAGCTGAC CCGCCGGGGC
GCAATTCGCG CTATGCGGCC GGGTGCGGCC GAACGGCCAG CCCGCGGGAT CGTCTCGCAC
CTGGACACGC TTGGTGCGCA GGTGAAGGCG CTGAAGGAGA ACGGCCGCCT CGAACTGGTC
TCGATCGGCC ACTGGTCGGC GCGGTTCGCG GAGGGGGCTC GCGGCTCGAT CTTTTCCGGC
AAGGGAACCT ATCGCGGAAC CATCCTTCCC CTGAAGGCTT CTGGACACAC TTTCAATGAC
GAGATCGACA CGCAACCGAC CGGCTGGCGG CACATCGAGC TGCGCGTCGA TGCGCTTGCC
CGCGACCGGA GCGATCTGGT GCAGCTCGGA ATTGACGTTG GCGACATTGT CGCCATCGAT
CCCCAGCCCG AGTTCCTCGA CAACGGGTTC ATCGTTTCGC GGCATCTCGA CGACAAGGCC
GGGGTGGCCA TCATGCTTGC GGCGCTCGAG GCCATGCAGC GCCAGAAGGT GGAAACGCCG
GTCGACACCT ATTGGCTCTT CACCATCGGC GAGGAGGTGG GCGTTGGCGC CTCGGCTGCA
ATCGTTCCGG AAATCGCCTC TCTGGTGGCG ATCGACAACG GTACGACCGC GCCGGGCCAG
AATTCGGACG AGTTCGGCGT TACGCTCGCC ATGGCGGACC AGACAGGGCC CTTCGACTAT
CATCTCTCGA GAAAGCTCTA CGAACTTTGC GGCGAGCATG GCATCCGCGT TCAGAAGGAC
GTCTTCCGCT ACTATCGCTC CGACGCCGCA TCCGCGCTCG AAGCGGGGCA CGACGTCCGC
ACGGCGCTTC TTACCTTCGG CGTCGACGCG TCGCACGGCT ATGAGCGCAT CCATCTTCAC
GCGCTGATGT CGGTTGCGAA GCTTGCGGTG TATCACGCGG CAAGCGAGGT CCAGATCGAG
CGTGACGCGG AGGAAGTCTC CGGGCTTCGG GGCTTTACCC GCCAAAAGGT TCGGCAGGCC
GAGCAGGATC TGAAGGCCGA CGAGCCCGAG GGACCTTAG
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| Protein sequence | MIATTHSMQT PINIDPDYLT SRLKALLEIA SPTGFTDEAV RYTARELERL GLEVKLTRRG
AIRAMRPGAA ERPARGIVSH LDTLGAQVKA LKENGRLELV SIGHWSARFA EGARGSIFSG
KGTYRGTILP LKASGHTFND EIDTQPTGWR HIELRVDALA RDRSDLVQLG IDVGDIVAID
PQPEFLDNGF IVSRHLDDKA GVAIMLAALE AMQRQKVETP VDTYWLFTIG EEVGVGASAA
IVPEIASLVA IDNGTTAPGQ NSDEFGVTLA MADQTGPFDY HLSRKLYELC GEHGIRVQKD
VFRYYRSDAA SALEAGHDVR TALLTFGVDA SHGYERIHLH ALMSVAKLAV YHAASEVQIE
RDAEEVSGLR GFTRQKVRQA EQDLKADEPE GP
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