Gene Smed_3662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3662 
Symbol 
ID5318676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp99529 
End bp100113 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID640775475 
Producthypothetical protein 
Protein accessionYP_001312408 
Protein GI150375812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.353198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0552159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAT TCATCGTCCG CAAATCCATC ACGCTCGTTG AGGACATCTT TCACGACGGC 
GGTCCGGTAG CAACCGTCCC GCGGCGCCGC GCAGCGGCCG TCGCAATTGT CAGCAATCCC
TTTGCCGGAC GCTATGTCGA GGATCTGCAG CCCGCCATGG AAGATCTGAA GCCGTTGGGC
CTACGGATGA CGGACAATCT GGTCGGAGCC CTCGGCGGCG ACACGTCGCT GATCGATGGC
TACGGCAAGG GGGTTATCGT CGGTTCGGCG GGTGAGCTCG AACATGGCGC GCTCTGGCAC
GTTCCGGGCG GCTATGCCAT GCGCGAACGC CTCGGAGAGG CATTGGCCAT CGTCCCTTCG
GCTAAAAAGG TCGGCGGCTT CGGCGCTCGC ATCGATATCC CGATCGGCCA CAAGAACGCC
GCCTATGTGC GCAGCCACTT CGACGCCATG GAGATCGGCG TTCCGGACGG CCCGCGCCCC
GATGAACTCC TATTGTGCCT GGTGATGACC TGCGGCCCGC GTATTCACGC ACGCATGGGC
GGCCTCGCCG CCTCCGACAT CAAGGCCTTC GACGGATTGC GTTGA
 
Protein sequence
MPQFIVRKSI TLVEDIFHDG GPVATVPRRR AAAVAIVSNP FAGRYVEDLQ PAMEDLKPLG 
LRMTDNLVGA LGGDTSLIDG YGKGVIVGSA GELEHGALWH VPGGYAMRER LGEALAIVPS
AKKVGGFGAR IDIPIGHKNA AYVRSHFDAM EIGVPDGPRP DELLLCLVMT CGPRIHARMG
GLAASDIKAF DGLR