| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3646 |
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| Symbol | |
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| ID | 5318393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 83218 |
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| End bp | 84165 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775459 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312392 |
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| Protein GI | 150375796 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCT ATGTCCTGAC GCGGCTGATT GCCGTGGTGC CCGTTCTGTT CGGGCTCTCC
ATCATCGTTT TCCTGGTGAT GACTCTTATT CCCGGCGATG CCGCGACGGC CATTCTCGGC
TCGTATGCGA CGCCGGAAAA TGTGGAGCGC ATCAACCGCG ACCTCGGGCT CGACAAGCCG
CTGGTGCAGC AATACGTCAT CTGGATGGGT AACGTGTTGC AGGGCGACTT CGGCCGTTCC
TTCGCCTTGA ACCGGCCCGT GCTCGACGAG GTACTGGAGC GGTTCCAGGC AACGCTGGTA
CTCGCCGGCG TATCGCTGGT CGTGTGTTCG CTAATCGGCC TTCTTGCGGG TGTGATCTCC
GCGGTGCGCC AGTTCGGCTG GGCCGACCGC ATCATCACCT TTTTCGTCCT GGCGGGCATT
TCCATGCCGT CCTTCTGGCT CGGCCTTCTG CTGATCTATC TCTTCGCCGT TCATTGGCGC
ATCCTTCCGG CGTCCGGCAT GTACGCGGTC TATGGCGGGG GTGACCTGAA GGACCTTCTG
CTCCATCTGA TCCTGCCGGC AACCACCCTT GCCGTGGTTG CCGCGGGCGT TATCGCGCGG
CTGACACGTG GAGCGATGCT CGAGGTCCTG CGCCAGGATT ATGTGCGCAC TGCCCGCGCC
AAGGGCTTGC CCGAGCGTAG AGTGATCTAC GCTCATGCCT TTCGTGCGGC CCTTGTCAGC
GTCATTCCGG CCATAGGCAT CCAGGCCGGT TTCGTGCTCG GCGGCGCCGT CTATGTCGAA
ACGGTGTTCC AGTGGCCCGG CATCGGCGCA ATGCTCGTGA AGGCGATTTC GGCGCGCGAT
ATCCTGCTGG TGCAGGGCGG CGTGCTCGTC GTTGCGGCCA GTTACGTGCT GTTCAATCTT
CTCGCCGATG TCGTTCAGTC CATGCTCGAT CCGAGGATTC GTACATGA
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| Protein sequence | MPSYVLTRLI AVVPVLFGLS IIVFLVMTLI PGDAATAILG SYATPENVER INRDLGLDKP
LVQQYVIWMG NVLQGDFGRS FALNRPVLDE VLERFQATLV LAGVSLVVCS LIGLLAGVIS
AVRQFGWADR IITFFVLAGI SMPSFWLGLL LIYLFAVHWR ILPASGMYAV YGGGDLKDLL
LHLILPATTL AVVAAGVIAR LTRGAMLEVL RQDYVRTARA KGLPERRVIY AHAFRAALVS
VIPAIGIQAG FVLGGAVYVE TVFQWPGIGA MLVKAISARD ILLVQGGVLV VAASYVLFNL
LADVVQSMLD PRIRT
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