| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3597 |
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| Symbol | |
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| ID | 5318977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 24208 |
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| End bp | 24987 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775411 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001312344 |
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| Protein GI | 150375748 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.475551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCC GGCTTCAAGG TAAACGGATC ATGGTGACCG GCGCGGCGCA GGGCATCGGC
CTCGCCATTG CCGAAGTGTT CCTGTCGGAA GGGGCGGCAC TCCTTCTCGT CGACCGGGAC
GGCCCTCTGC TCGAAAGGGA AGCGAGCCGG CTGCAAGAGC AGGGGTGGGA GCTCGTCTAC
GCTCAGGCCG ACATTACCGA TGCGCAAGCG ATCAGCGTGG CGGTCTCCAG CGCCGCAACG
TCGATCGGGC GGATCAACGC GCTTGTCAAC AATGCCGGAA TCAACGTGTT CTCCGAGCCG
CTGGCGATGA GCGACGCCGA TTGGCAACGC TGTTTTGACG TAAACCTGCG CGGGGCCTGG
AACTGCTGCA AGGCGGTTCT GCCGAATTTG ATCGAGCAGG GCGGCGGAGC GATCCTCAAC
ATCGCCTCAA CGCATGCATT CACCATCATT CCGCATACCT TTCCCTATCC GGTGGCAAAG
CATGCGCTGC TCGGCATGAC GAAAGCGCTC GGCATTGAAT ATGCATCGAA GGGCGTGCGG
GTAAATGCGC TGGCGCCGGG TTATGTCCTG ACGCAGAAGG CTTACGACTA CTGGAACAGT
TTCCCGGACC CGGCGGCAGC CGAGGCGGCG ACGATGAAAC TTCATCCTGG CGGCCGGATC
GCGACAGCGG AAGAGATCGC CCGTGCCGCC GTCTTCATGA TTTCAGACGA ATGCCCTTTC
ATGAACGCCA CGTGTCTGAC GGTGGATGGC GGTCTCAGCG TCCTTCATCA TCCGGCCTGA
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| Protein sequence | MSARLQGKRI MVTGAAQGIG LAIAEVFLSE GAALLLVDRD GPLLEREASR LQEQGWELVY
AQADITDAQA ISVAVSSAAT SIGRINALVN NAGINVFSEP LAMSDADWQR CFDVNLRGAW
NCCKAVLPNL IEQGGGAILN IASTHAFTII PHTFPYPVAK HALLGMTKAL GIEYASKGVR
VNALAPGYVL TQKAYDYWNS FPDPAAAEAA TMKLHPGGRI ATAEEIARAA VFMISDECPF
MNATCLTVDG GLSVLHHPA
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