Gene Smed_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3576 
Symbol 
ID5318081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp4121 
End bp4504 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content55% 
IMG OID640775391 
ProductKup2 potassium uptake protein 
Protein accessionYP_001312324 
Protein GI150375728 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT CCCTCGACCA CGCACAAGCG AACAATATGC CACAATTTCT GGGGCTGACC 
GTCGGAGCAA TCGGCGTAGT TTATGGCGAC ATCGGGACCA GTTCCCTCTA TGCCTTTCGC
GAGGCGCTGC GCACGTTTGG ACCAGGTGGT GTCGGGCGGG ACGAAGTCAT CGGTCTCGTC
TCGCTGGTAC TCTGCACGCT GACCGCCATC GCAACTTTGA AATACGTCAT CTTCCTCCTT
CGCGCCGACA ACGACGGCGA GGGTGGAACG TTGTCCTTGC TCGCCCTGCT GCTGAAGAAG
GGCACAAAGA ATCCAGTCTT GATGTTTTTT GCCGGCATTC TCGTATTTTT TCTAATGTTC
AGCCTGACGA AAGAGACGAC ATGA
 
Protein sequence
MTDSLDHAQA NNMPQFLGLT VGAIGVVYGD IGTSSLYAFR EALRTFGPGG VGRDEVIGLV 
SLVLCTLTAI ATLKYVIFLL RADNDGEGGT LSLLALLLKK GTKNPVLMFF AGILVFFLMF
SLTKETT