Gene Tmel_1876 details

Gene Information

• Locus tag: Tmel_1876
• ID: 5297475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1861024
• End bp: 1861677
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640770144
• Product: dihydrodipicolinate reductase
• Protein accession: YP_001307095
• Protein GI: 150021741
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0289] Dihydrodipicolinate reductase
• TIGRFAM ID: [TIGR00036] dihydrodipicolinate reductase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTG GCGTAATAGG ATACAAAGGA AAAATGGGCA AACTAATTAC TAAAACTTTT 
TCAAACAGAG GACATAATTG TGTACTTTTT GTTGACAAAG ATGAAATAGA ACAAATAGAT 
ATCCCAGAAG TCATAGTTGA TTTTTCTTTA AAAGATGCGT TAGATAAAAC AATAAATCTT 
TGCAAGAAAA ACAAATCAAA TCTCGTTATT GGTACAACAG GATTTTCAAA TGAAGATTTA 
GAAAAGTTAC AAAAACTTTC AAAAGAAGTT GCTTTAATCC AATCATATAA TTTCTCACTT 
GGAGTAAATA TTATTGTTGA AATACTAAAC AAGTTAAACA ATATTTTAAA GGATTGGGAT 
TGTGAAATTT TCGAAATACA CCATTCTCAA AAAAAAGATA AACCATCAGG AACTGCTCTT 
ATGTTTAAAG ACGCACTAAA AAAAGAAGTA AATATCAATT CATCAAGACT TGGTGGAATC 
CCAGGTGACC ATACTATTTT TTTTGCAAAT CAGGGTGAAT TAATCTCAAT TTCACACCGT 
ACAATTTCAC GTGAAGTTTT TGCATTAGGT GCATTAAAAG CTGCAGAATG GATTTTAAAT 
AAAAAAAATG GTTTTTACAC ATTCAAAGAT ATACTTAAGG AGGAGTTAGA ATGA 

 

Protein sequence

MKFGVIGYKG KMGKLITKTF SNRGHNCVLF VDKDEIEQID IPEVIVDFSL KDALDKTINL 
CKKNKSNLVI GTTGFSNEDL EKLQKLSKEV ALIQSYNFSL GVNIIVEILN KLNNILKDWD 
CEIFEIHHSQ KKDKPSGTAL MFKDALKKEV NINSSRLGGI PGDHTIFFAN QGELISISHR 
TISREVFALG ALKAAEWILN KKNGFYTFKD ILKEELE