Gene Tmel_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1817 
Symbol 
ID5297464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1801310 
End bp1802650 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content26% 
IMG OID640770085 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001307037 
Protein GI150021683 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGG GAGTTATAAA ATGTTTGAAA GATAAATCAA AAAAAGATTT AAGGATTTTG 
TATGCATCGG AAGAATTTTT GCAATTTTTA AACGTTAATG AAATATCAAT ATTTGATGAT
ATTTCATCTA GATTAGATGA GGATATAGTA AAAAAAATTA AAAATTTAAT GTTTTTAAAT
AAACCTAGTC GATTATTTGT TTATTCTGTA AATTTTAGTG GTTTTATTGA AATAACTGTT
ATTCCAGAAG GTGATTTTTG TTGGATTGTG TTTAGTGATT TGTCTGAATT TTTGAAAAAA
CAGTATGAAA TGAATAGATT AGATTTTTTT AATAAATTGG AGCTTGAATT ATTATCTGTT
TTTATAGATC CAAAAGATAT CTTTGAAGTT TATAATTCAT TAGTAGAGAA ATTTATGAAA
ATTGATGGCG TATATTCAGT TGGAATTTTT CGTGTTGAAA ATGGTGTAGT AAAAGAAATT
TCTTCATCTA AAAATTTCGT TTATTCGGAT AATCTTGAGT TAAAGCTTAC GGAGATATAT
AAGAATGGTA AATATTATAT TGAAAAAATT AATGGAAAAT ATGTTTTATT TTTTCCTATT
TACCATTCAA ATATTGTTAT TGAGATAGTA ATTTTTGAAT TAGAGGATAA AAAGTTTTTT
GATGAATATT TGCTTAATTT TTTAAAGGAG ATTGAAGTTG CTATCTCAAT GACTATAGAT
AGGATTTCTT TAAAAAATGA GATTTCACGT AAAAATCATC AATTATTGGA AGCAATAGAT
GATATTATTG AAGTTATGTC AAAAATAGTT GAATTAAGAG ATCCGTACAC TGCGGGACAT
CAGAAAAACG TTTCTAGGCT TTCATATGAA ATTGGAAAAA GATTAGGTTT TGACAATGAA
CGATTACTTA TTTTAAAATA TGCAGCGTTG GTTCATGATA TTGGTAAAAT TGGTGTTCCT
ATTGAAATTT TAGTTAAACC TTCAAAGCTT TCTGACTTAG AATTCAACTT AATTAAGGAG
CATCCAAAAA TAGGTTATAA TTTGTTATCT GATTTAATTT CACCTTACGA TAAAATAAGT
GAAATTGTAC TTCAACATCA TGAAAGAATA GATGGAAGTG GTTATCCATT TGGATTAAAG
GGAGATGATA TCTTGATGGA ATCAAAAGTT ATAGCAGTAG CTGATACTGT TGATGCAATG
ATATCTCATA GACCGTATAG ACCTTCTTTG GGATTGGAAA AAGCAATTGT TGAATTAAAA
AATAATGCAA GAAAAAAATA TGACGAGAAA GTTGTTGAAG TATGTCTAGA TTTGTTTAAT
GAAGGTTTTA AATTTTATTG A
 
Protein sequence
MNLGVIKCLK DKSKKDLRIL YASEEFLQFL NVNEISIFDD ISSRLDEDIV KKIKNLMFLN 
KPSRLFVYSV NFSGFIEITV IPEGDFCWIV FSDLSEFLKK QYEMNRLDFF NKLELELLSV
FIDPKDIFEV YNSLVEKFMK IDGVYSVGIF RVENGVVKEI SSSKNFVYSD NLELKLTEIY
KNGKYYIEKI NGKYVLFFPI YHSNIVIEIV IFELEDKKFF DEYLLNFLKE IEVAISMTID
RISLKNEISR KNHQLLEAID DIIEVMSKIV ELRDPYTAGH QKNVSRLSYE IGKRLGFDNE
RLLILKYAAL VHDIGKIGVP IEILVKPSKL SDLEFNLIKE HPKIGYNLLS DLISPYDKIS
EIVLQHHERI DGSGYPFGLK GDDILMESKV IAVADTVDAM ISHRPYRPSL GLEKAIVELK
NNARKKYDEK VVEVCLDLFN EGFKFY