Gene Tmel_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1815 
Symbol 
ID5297271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1798187 
End bp1799521 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content33% 
IMG OID640770083 
ProductGTPase-like protein 
Protein accessionYP_001307035 
Protein GI150021681 
COG category[R] General function prediction only 
COG ID[COG2403] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA AAAAAGTTAT TATTATGGGT GCAGCAGGTC GTGATTTTCA TAACTTTAAC 
GCTTATTTTA GGAATAATCC AGATTATGAA GTTGTAGCAT TTACAGCAAC GCAAATACCA
GATATTGAGG GAAGGGTTTA TCCTGCGGAA TTAGCAGGAG AATTATATCC AAATGGTATT
CCCATTGAAC CAGAGGAAAA GTTGGTTGAA TTAATAAAAG AACATAAAGT TGATGAAGTA
ATTTTGGCAT ATAGTGACCT TCCACACCAA TACGTTATGG AAAAAGCTGA AATTGTTTTA
GCCGCTGGTG CTGATTTCAA ATTAATGGGT CCAAACAATA CCATGATTGA ATCTACAAAA
CCTGTAATTT CAGTTTGTGC CATAAGAACA GGTTGTGGAA AAAGCCAAAC AACAAGAAGA
GTTCTTGATA TTTTAAGAAG TTTTGGCAAA AAAGTTATTT CCATTAGACA CCCAATGCCA
TATGGTGATT TAGTTGCACA GAAAGTTCAA AGATTTGCTG ATTATTCTGA TTTAGATAAA
CATAAATGTA CAATAGAAGA AAGAGAAGAA TACGAACCAC ACATTGATAG AAAGAGTGTA
ATTTATGCAG GAGTTGATTA TGAAGCAATA TTAAGAGCAG CAGAAGCTGA AGATCCAGAT
ATTATTCTTT GGGATGGAGG AAATAATGAT TTTCCATTCT ATAAAACAGA TCTTTTAATT
ACCGTAGTTG ATCCACACAG ACCTGGTCAT GAAATTGCTT ATTATCCAGG TATGTCTAAC
TTGTTAATGG CGGATGTTAT TGTAATAAAT AAGGAAGAAA CTGCTGATAT TGAAGGAATT
GAAAAGGTAA GAAAAAATAT TGAAAAATGG AATCCAAATG CAATTGTTGT AGATGCTGCA
TCACCAATTT TTGTAGAAAA TCCTGAAGAG ATAAAAGGTA AAAGGGTTCT TGTAGTAGAA
GATGGTCCAA CTCTAACTCA CGGTGAAATG AGATATGGGG CAGGTTATGT TGCAGCAAAA
AAATTTGGAG CAGCTGAAAT CATTGATCCA AGGCCATATG CTGTTGGTTC TATTGTGGAT
ACTTATAAAA AATATTCACA TCTTGATATG ATTCTTCCAG CAATGGGTTA TGGAGAAAAG
CAAATGAAAG AGCTAGAAGA AACAATCAAT AGAGCAGATG TTGATTTAGT AATTATAGGT
ACTCCTATTG ATCTTAGAAG AGTTACAAAA TTAAATAAAC CAGCAGTTAG AGTAACTTAC
GAATTACAAG AAATCGGAAA GCCAACCCTT GAAGACATAA TAAAAGAATT TTTGCAAAAG
AAAGGATTGT TATAA
 
Protein sequence
MAKKKVIIMG AAGRDFHNFN AYFRNNPDYE VVAFTATQIP DIEGRVYPAE LAGELYPNGI 
PIEPEEKLVE LIKEHKVDEV ILAYSDLPHQ YVMEKAEIVL AAGADFKLMG PNNTMIESTK
PVISVCAIRT GCGKSQTTRR VLDILRSFGK KVISIRHPMP YGDLVAQKVQ RFADYSDLDK
HKCTIEEREE YEPHIDRKSV IYAGVDYEAI LRAAEAEDPD IILWDGGNND FPFYKTDLLI
TVVDPHRPGH EIAYYPGMSN LLMADVIVIN KEETADIEGI EKVRKNIEKW NPNAIVVDAA
SPIFVENPEE IKGKRVLVVE DGPTLTHGEM RYGAGYVAAK KFGAAEIIDP RPYAVGSIVD
TYKKYSHLDM ILPAMGYGEK QMKELEETIN RADVDLVIIG TPIDLRRVTK LNKPAVRVTY
ELQEIGKPTL EDIIKEFLQK KGLL