Gene Tmel_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1784 
Symbol 
ID5296915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1771433 
End bp1771930 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content29% 
IMG OID640770052 
Productiron dependent repressor 
Protein accessionYP_001307004 
Protein GI150021650 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGGTA ACTTAAATTT AACTAAAGCT GAACGTAAGT ACTTGTTAGT TGTCTTTTTA 
ACATTAAATT CAATGGGTTG GACGAGATTA AAAAAGGTTT CTGATTATGC TAATGTAAAA
ATGCCTTCTG CTAAACAGGC ATTGAATTCG TTAGCGCAAA AAGGGCTAGT TTATTATGAA
AAAAGAGGAG CAATTACACT GACAGAAGAA GGAAAGAAAA TAGCATTAAG GGAAAATAAA
AATATACAGG CATTTAAGAA TTTTTTGATT GATTTTTTAA AAATTGCTCC TGAGAAAGCT
CATAAATCGT GTATGAAAAT ATACTTCGAT TTAGATGATG AAGTAGCAGA AAAGTTTGTA
ATGTTTTCAA AATTTATGAA TGAATGTCCA CAAGAAAAAC CTCTTTTTTT AAAACATTTT
GATGAATTTT TAAAAAATAA TAGAATTGTT AGCAAATGCC CTTTCATGAA TTTGGAGGAT
GATAAAGATG GAGATTGA
 
Protein sequence
MEGNLNLTKA ERKYLLVVFL TLNSMGWTRL KKVSDYANVK MPSAKQALNS LAQKGLVYYE 
KRGAITLTEE GKKIALRENK NIQAFKNFLI DFLKIAPEKA HKSCMKIYFD LDDEVAEKFV
MFSKFMNECP QEKPLFLKHF DEFLKNNRIV SKCPFMNLED DKDGD